Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.82■□□□□ 0.28
ATRXP46100 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.82■□□□□ 0.28
ATRXP46100 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.82■□□□□ 0.28
ATRXP46100 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.82■□□□□ 0.28
ATRXP46100 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.82■□□□□ 0.28
ATRXP46100 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATRXP46100 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATRXP46100 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATRXP46100 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATRXP46100 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
ATRXP46100 AL512408.1-201ENST00000569378 2000 ntBASIC16.82■□□□□ 0.28
ATRXP46100 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATRXP46100 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATRXP46100 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATRXP46100 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATRXP46100 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATRXP46100 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ATRXP46100 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.81■□□□□ 0.28
ATRXP46100 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 IGHV3-71-201ENST00000523324 359 ntBASIC16.81■□□□□ 0.28
ATRXP46100 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.81■□□□□ 0.28
ATRXP46100 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 AC104390.1-201ENST00000555663 520 ntBASIC16.81■□□□□ 0.28
ATRXP46100 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.81■□□□□ 0.28
ATRXP46100 HEIH-201ENST00000623091 1652 ntBASIC16.81■□□□□ 0.28
ATRXP46100 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ATRXP46100 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.81■□□□□ 0.28
ATRXP46100 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.81■□□□□ 0.28
ATRXP46100 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.81■□□□□ 0.28
ATRXP46100 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATRXP46100 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.81■□□□□ 0.28
ATRXP46100 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ATRXP46100 ATP5G2P4-201ENST00000442175 420 ntBASIC16.8■□□□□ 0.28
ATRXP46100 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.8■□□□□ 0.28
ATRXP46100 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.8■□□□□ 0.28
ATRXP46100 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.8■□□□□ 0.28
ATRXP46100 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.8■□□□□ 0.28
ATRXP46100 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.8■□□□□ 0.28
ATRXP46100 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.8■□□□□ 0.28
ATRXP46100 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ATRXP46100 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.8■□□□□ 0.28
ATRXP46100 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
ATRXP46100 AC079834.2-201ENST00000609776 1949 ntBASIC16.8■□□□□ 0.28
ATRXP46100 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.8■□□□□ 0.28
ATRXP46100 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.8■□□□□ 0.28
ATRXP46100 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATRXP46100 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.8■□□□□ 0.28
ATRXP46100 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATRXP46100 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATRXP46100 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATRXP46100 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATRXP46100 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.79■□□□□ 0.28
ATRXP46100 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ATRXP46100 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ATRXP46100 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATRXP46100 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.79■□□□□ 0.28
ATRXP46100 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.79■□□□□ 0.28
ATRXP46100 AL162377.1-201ENST00000618844 1793 ntBASIC16.79■□□□□ 0.28
ATRXP46100 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATRXP46100 KRT8P7-201ENST00000533003 1432 ntBASIC16.79■□□□□ 0.28
ATRXP46100 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms