Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 HEIH-201ENST00000623091 1652 ntBASIC23.16■■□□□ 1.3
RFC4P35249 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.16■■□□□ 1.3
RFC4P35249 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC23.16■■□□□ 1.3
RFC4P35249 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFC4P35249 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.16■■□□□ 1.3
RFC4P35249 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.16■■□□□ 1.3
RFC4P35249 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFC4P35249 CSF3-203ENST00000394148 622 ntTSL 3 BASIC23.16■■□□□ 1.3
RFC4P35249 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC23.16■■□□□ 1.3
RFC4P35249 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC23.16■■□□□ 1.3
RFC4P35249 AC068472.1-201ENST00000474589 881 ntBASIC23.16■■□□□ 1.3
RFC4P35249 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC23.16■■□□□ 1.3
RFC4P35249 AC009533.2-201ENST00000543664 586 ntBASIC23.16■■□□□ 1.3
RFC4P35249 AC145285.3-201ENST00000564603 959 ntBASIC23.16■■□□□ 1.3
RFC4P35249 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC23.16■■□□□ 1.3
RFC4P35249 AC008687.5-201ENST00000593746 558 ntBASIC23.16■■□□□ 1.3
RFC4P35249 AC027601.4-201ENST00000611259 610 ntBASIC23.16■■□□□ 1.3
RFC4P35249 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFC4P35249 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFC4P35249 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFC4P35249 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFC4P35249 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RFC4P35249 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFC4P35249 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.15■■□□□ 1.3
RFC4P35249 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.15■■□□□ 1.3
RFC4P35249 KRT18P41-201ENST00000518924 1277 ntBASIC23.15■■□□□ 1.3
RFC4P35249 IGHV3-22-201ENST00000520721 359 ntBASIC23.15■■□□□ 1.3
RFC4P35249 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC23.15■■□□□ 1.3
RFC4P35249 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFC4P35249 AC055717.3-201ENST00000622967 595 ntBASIC23.15■■□□□ 1.3
RFC4P35249 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC23.15■■□□□ 1.3
RFC4P35249 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RFC4P35249 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RFC4P35249 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFC4P35249 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.15■■□□□ 1.3
RFC4P35249 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC23.15■■□□□ 1.3
RFC4P35249 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
RFC4P35249 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RFC4P35249 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RFC4P35249 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
RFC4P35249 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RFC4P35249 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RFC4P35249 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC23.14■■□□□ 1.3
RFC4P35249 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
RFC4P35249 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
RFC4P35249 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFC4P35249 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
RFC4P35249 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.14■■□□□ 1.29
RFC4P35249 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
RFC4P35249 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFC4P35249 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.14■■□□□ 1.29
RFC4P35249 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFC4P35249 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC23.14■■□□□ 1.29
RFC4P35249 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFC4P35249 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFC4P35249 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC23.14■■□□□ 1.29
RFC4P35249 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.14■■□□□ 1.29
RFC4P35249 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
RFC4P35249 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
RFC4P35249 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFC4P35249 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
RFC4P35249 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC23.13■■□□□ 1.29
RFC4P35249 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.13■■□□□ 1.29
RFC4P35249 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC23.13■■□□□ 1.29
RFC4P35249 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC23.13■■□□□ 1.29
RFC4P35249 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC23.13■■□□□ 1.29
RFC4P35249 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 CD63-204ENST00000546939 779 ntTSL 3 BASIC23.13■■□□□ 1.29
RFC4P35249 AC021087.4-201ENST00000563761 564 ntBASIC23.13■■□□□ 1.29
RFC4P35249 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.13■■□□□ 1.29
RFC4P35249 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFC4P35249 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
RFC4P35249 INTS4P1-201ENST00000438455 1935 ntBASIC23.13■■□□□ 1.29
RFC4P35249 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.13■■□□□ 1.29
RFC4P35249 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
RFC4P35249 AC125437.2-201ENST00000625180 2167 ntBASIC23.13■■□□□ 1.29
RFC4P35249 NFYC-AS1-201ENST00000606277 1687 ntBASIC23.13■■□□□ 1.29
RFC4P35249 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFC4P35249 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RFC4P35249 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.12■■□□□ 1.29
RFC4P35249 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
RFC4P35249 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFC4P35249 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.12■■□□□ 1.29
RFC4P35249 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.12■■□□□ 1.29
RFC4P35249 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.12■■□□□ 1.29
RFC4P35249 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFC4P35249 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFC4P35249 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms