Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.5■□□□□ 0.71
CHRNA3P32297 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHRNA3P32297 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.5■□□□□ 0.71
CHRNA3P32297 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.5■□□□□ 0.71
CHRNA3P32297 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.5■□□□□ 0.71
CHRNA3P32297 AC145285.6-201ENST00000604632 637 ntBASIC19.5■□□□□ 0.71
CHRNA3P32297 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
CHRNA3P32297 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CHRNA3P32297 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CHRNA3P32297 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHRNA3P32297 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHRNA3P32297 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CHRNA3P32297 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.5■□□□□ 0.71
CHRNA3P32297 AL499627.1-201ENST00000569373 2188 ntBASIC19.5■□□□□ 0.71
CHRNA3P32297 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.5■□□□□ 0.71
CHRNA3P32297 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHRNA3P32297 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHRNA3P32297 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHRNA3P32297 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHRNA3P32297 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHRNA3P32297 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHRNA3P32297 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.49■□□□□ 0.71
CHRNA3P32297 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHRNA3P32297 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHRNA3P32297 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHRNA3P32297 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHRNA3P32297 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CHRNA3P32297 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.49■□□□□ 0.71
CHRNA3P32297 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHRNA3P32297 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.49■□□□□ 0.71
CHRNA3P32297 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CHRNA3P32297 MYC-208ENST00000641036 567 ntBASIC19.49■□□□□ 0.71
CHRNA3P32297 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHRNA3P32297 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CHRNA3P32297 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHRNA3P32297 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHRNA3P32297 AP000997.3-201ENST00000623333 2250 ntBASIC19.49■□□□□ 0.71
CHRNA3P32297 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CHRNA3P32297 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.49■□□□□ 0.71
CHRNA3P32297 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA3P32297 AC008764.6-201ENST00000595909 2069 ntBASIC19.48■□□□□ 0.71
CHRNA3P32297 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA3P32297 HCG11-201ENST00000411553 5696 ntBASIC19.48■□□□□ 0.71
CHRNA3P32297 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA3P32297 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA3P32297 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA3P32297 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA3P32297 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.48■□□□□ 0.71
CHRNA3P32297 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA3P32297 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA3P32297 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA3P32297 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.48■□□□□ 0.71
CHRNA3P32297 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.48■□□□□ 0.71
CHRNA3P32297 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA3P32297 C2orf69P3-201ENST00000565542 1120 ntBASIC19.48■□□□□ 0.71
CHRNA3P32297 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.48■□□□□ 0.71
CHRNA3P32297 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
CHRNA3P32297 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.48■□□□□ 0.71
CHRNA3P32297 AC067852.2-201ENST00000590513 2313 ntBASIC19.48■□□□□ 0.71
CHRNA3P32297 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA3P32297 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CHRNA3P32297 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA3P32297 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA3P32297 AC090340.1-201ENST00000620778 4980 ntBASIC19.48■□□□□ 0.71
CHRNA3P32297 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.48■□□□□ 0.71
CHRNA3P32297 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.48■□□□□ 0.71
CHRNA3P32297 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.47■□□□□ 0.71
CHRNA3P32297 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHRNA3P32297 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.47■□□□□ 0.71
CHRNA3P32297 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CHRNA3P32297 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.47■□□□□ 0.71
CHRNA3P32297 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
CHRNA3P32297 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.47■□□□□ 0.71
CHRNA3P32297 FAM210CP-201ENST00000445714 574 ntBASIC19.47■□□□□ 0.71
CHRNA3P32297 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.47■□□□□ 0.71
CHRNA3P32297 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.47■□□□□ 0.71
CHRNA3P32297 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.47■□□□□ 0.71
CHRNA3P32297 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.47■□□□□ 0.71
CHRNA3P32297 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.47■□□□□ 0.71
CHRNA3P32297 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHRNA3P32297 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CHRNA3P32297 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.47■□□□□ 0.71
CHRNA3P32297 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA3P32297 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms