Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 BMI1P1-201ENST00000445879 941 ntBASIC19.67■□□□□ 0.74
HOXD11P31277 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD11P31277 LAMTOR5-AS1-202ENST00000457535 817 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXD11P31277 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXD11P31277 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD11P31277 AL136088.1-201ENST00000531002 541 ntTSL 4 BASIC19.67■□□□□ 0.74
HOXD11P31277 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXD11P31277 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD11P31277 AL512506.2-201ENST00000624472 458 ntBASIC19.67■□□□□ 0.74
HOXD11P31277 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXD11P31277 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
HOXD11P31277 IL9RP2-201ENST00000423948 1312 ntBASIC19.67■□□□□ 0.74
HOXD11P31277 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD11P31277 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD11P31277 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD11P31277 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD11P31277 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HOXD11P31277 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 AC243964.3-201ENST00000623022 2028 ntBASIC19.66■□□□□ 0.74
HOXD11P31277 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD11P31277 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD11P31277 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HOXD11P31277 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXD11P31277 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
HOXD11P31277 MTCO2P1-201ENST00000424648 477 ntBASIC19.66■□□□□ 0.74
HOXD11P31277 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HOXD11P31277 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC19.66■□□□□ 0.74
HOXD11P31277 THRB-AS1-201ENST00000432368 1216 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXD11P31277 AL035246.1-201ENST00000433554 1255 ntBASIC19.66■□□□□ 0.74
HOXD11P31277 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD11P31277 AC114982.2-201ENST00000461396 358 ntBASIC19.66■□□□□ 0.74
HOXD11P31277 RPL12P33-201ENST00000485633 492 ntBASIC19.66■□□□□ 0.74
HOXD11P31277 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD11P31277 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXD11P31277 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXD11P31277 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.66■□□□□ 0.74
HOXD11P31277 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXD11P31277 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXD11P31277 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD11P31277 AC073911.1-201ENST00000592296 504 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD11P31277 NIFKP6-201ENST00000598115 845 ntBASIC19.66■□□□□ 0.74
HOXD11P31277 LINC01711-201ENST00000598340 967 ntBASIC19.66■□□□□ 0.74
HOXD11P31277 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXD11P31277 HYMAI.1-201ENST00000620949 238 ntBASIC19.66■□□□□ 0.74
HOXD11P31277 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD11P31277 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXD11P31277 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HOXD11P31277 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXD11P31277 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
HOXD11P31277 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXD11P31277 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 CD226-207ENST00000582621 1458 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD11P31277 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD11P31277 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXD11P31277 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD11P31277 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXD11P31277 AC092068.2-201ENST00000590491 1708 ntBASIC19.65■□□□□ 0.74
HOXD11P31277 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD11P31277 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD11P31277 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD11P31277 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD11P31277 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD11P31277 WNT16-202ENST00000361301 1230 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD11P31277 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD11P31277 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD11P31277 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HOXD11P31277 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXD11P31277 UBE2V1P1-201ENST00000430836 445 ntBASIC19.65■□□□□ 0.74
HOXD11P31277 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.65■□□□□ 0.74
HOXD11P31277 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HOXD11P31277 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD11P31277 ALDH1L1-AS1-201ENST00000512384 437 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXD11P31277 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXD11P31277 AC011773.4-201ENST00000562577 487 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD11P31277 AL450336.1-201ENST00000605180 586 ntBASIC19.65■□□□□ 0.74
HOXD11P31277 AL357078.3-201ENST00000607528 618 ntBASIC19.65■□□□□ 0.74
HOXD11P31277 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HOXD11P31277 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HOXD11P31277 AC134043.2-201ENST00000624206 2238 ntBASIC19.65■□□□□ 0.74
HOXD11P31277 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HOXD11P31277 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD11P31277 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
HOXD11P31277 ANKRD20A10P-201ENST00000457591 1515 ntBASIC19.65■□□□□ 0.74
HOXD11P31277 COX16-201ENST00000389912 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD11P31277 ANOS2P-203ENST00000472227 1816 ntBASIC19.65■□□□□ 0.74
HOXD11P31277 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms