Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 UNC93B7-201ENST00000509439 705 ntBASIC19.94■□□□□ 0.78
HOXA11P31270 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.94■□□□□ 0.78
HOXA11P31270 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HOXA11P31270 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.94■□□□□ 0.78
HOXA11P31270 AC124864.1-201ENST00000623408 392 ntBASIC19.94■□□□□ 0.78
HOXA11P31270 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HOXA11P31270 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXA11P31270 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.94■□□□□ 0.78
HOXA11P31270 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXA11P31270 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
HOXA11P31270 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXA11P31270 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXA11P31270 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.94■□□□□ 0.78
HOXA11P31270 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.94■□□□□ 0.78
HOXA11P31270 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXA11P31270 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA11P31270 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXA11P31270 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA11P31270 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXA11P31270 AC113404.2-201ENST00000507884 177 ntBASIC19.93■□□□□ 0.78
HOXA11P31270 GUSBP12-201ENST00000513727 720 ntBASIC19.93■□□□□ 0.78
HOXA11P31270 AC012615.1-201ENST00000565797 1299 ntBASIC19.93■□□□□ 0.78
HOXA11P31270 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.93■□□□□ 0.78
HOXA11P31270 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA11P31270 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.93■□□□□ 0.78
HOXA11P31270 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA11P31270 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA11P31270 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HOXA11P31270 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA11P31270 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA11P31270 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA11P31270 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA11P31270 AL031598.1-201ENST00000561511 1773 ntBASIC19.93■□□□□ 0.78
HOXA11P31270 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA11P31270 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXA11P31270 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA11P31270 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA11P31270 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA11P31270 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA11P31270 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXA11P31270 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXA11P31270 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
HOXA11P31270 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA11P31270 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA11P31270 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA11P31270 AC091607.1-201ENST00000490318 1060 ntBASIC19.92■□□□□ 0.78
HOXA11P31270 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.92■□□□□ 0.78
HOXA11P31270 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXA11P31270 AP005901.3-202ENST00000581653 237 ntBASIC19.92■□□□□ 0.78
HOXA11P31270 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.92■□□□□ 0.78
HOXA11P31270 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HOXA11P31270 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HOXA11P31270 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA11P31270 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HOXA11P31270 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA11P31270 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXA11P31270 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA11P31270 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXA11P31270 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXA11P31270 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXA11P31270 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA11P31270 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA11P31270 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA11P31270 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HOXA11P31270 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXA11P31270 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXA11P31270 TSPY19P-201ENST00000418461 509 ntBASIC19.91■□□□□ 0.78
HOXA11P31270 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HOXA11P31270 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
HOXA11P31270 IGHV3-47-201ENST00000425060 335 ntBASIC19.91■□□□□ 0.78
HOXA11P31270 TSPY18P-201ENST00000441642 509 ntBASIC19.91■□□□□ 0.78
HOXA11P31270 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HOXA11P31270 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.91■□□□□ 0.78
HOXA11P31270 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.91■□□□□ 0.78
HOXA11P31270 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXA11P31270 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.91■□□□□ 0.78
HOXA11P31270 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HOXA11P31270 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.91■□□□□ 0.78
HOXA11P31270 CROCCP3-202ENST00000420820 1947 ntBASIC19.91■□□□□ 0.78
HOXA11P31270 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXA11P31270 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA11P31270 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HOXA11P31270 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXA11P31270 LINC01126-201ENST00000623515 1646 ntBASIC19.91■□□□□ 0.78
HOXA11P31270 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA11P31270 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms