Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXA6P31267 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXA6P31267 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXA6P31267 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXA6P31267 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXA6P31267 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXA6P31267 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA6P31267 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA6P31267 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA6P31267 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA6P31267 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA6P31267 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
HOXA6P31267 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA6P31267 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.2■□□□□ 0.5
HOXA6P31267 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXA6P31267 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXA6P31267 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA6P31267 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA6P31267 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA6P31267 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA6P31267 AL356309.3-201ENST00000624132 1934 ntBASIC18.19■□□□□ 0.5
HOXA6P31267 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
HOXA6P31267 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA6P31267 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA6P31267 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA6P31267 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA6P31267 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA6P31267 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXA6P31267 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXA6P31267 PMS2P2-201ENST00000425039 1128 ntBASIC18.19■□□□□ 0.5
HOXA6P31267 HMGN1P19-201ENST00000436976 333 ntBASIC18.19■□□□□ 0.5
HOXA6P31267 MTCL1P1-201ENST00000446207 792 ntBASIC18.19■□□□□ 0.5
HOXA6P31267 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXA6P31267 KRT18P3-201ENST00000451602 1288 ntBASIC18.19■□□□□ 0.5
HOXA6P31267 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
HOXA6P31267 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXA6P31267 OR7E14P-202ENST00000530490 1290 ntBASIC18.19■□□□□ 0.5
HOXA6P31267 AC040169.1-201ENST00000565382 521 ntBASIC18.19■□□□□ 0.5
HOXA6P31267 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA6P31267 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
HOXA6P31267 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HOXA6P31267 AC008735.5-201ENST00000623544 497 ntBASIC18.19■□□□□ 0.5
HOXA6P31267 AL139288.1-201ENST00000623748 933 ntBASIC18.19■□□□□ 0.5
HOXA6P31267 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA6P31267 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA6P31267 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.19■□□□□ 0.5
HOXA6P31267 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA6P31267 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA6P31267 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.19■□□□□ 0.5
HOXA6P31267 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA6P31267 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXA6P31267 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HOXA6P31267 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXA6P31267 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXA6P31267 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXA6P31267 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXA6P31267 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXA6P31267 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HOXA6P31267 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 RPS2P1-201ENST00000434010 821 ntBASIC18.18■□□□□ 0.5
HOXA6P31267 RNA5SP415-201ENST00000517246 115 ntBASIC18.18■□□□□ 0.5
HOXA6P31267 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXA6P31267 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.18■□□□□ 0.5
HOXA6P31267 MIR3687-2-201ENST00000577708 61 ntBASIC18.18■□□□□ 0.5
HOXA6P31267 AL355385.1-201ENST00000606123 409 ntBASIC18.18■□□□□ 0.5
HOXA6P31267 MIR3687-1-201ENST00000614492 61 ntBASIC18.18■□□□□ 0.5
HOXA6P31267 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXA6P31267 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.18■□□□□ 0.5
HOXA6P31267 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HOXA6P31267 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXA6P31267 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HOXA6P31267 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA6P31267 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.17■□□□□ 0.5
HOXA6P31267 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HOXA6P31267 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXA6P31267 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HOXA6P31267 YBX2P1-201ENST00000394192 760 ntBASIC18.17■□□□□ 0.5
HOXA6P31267 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.17■□□□□ 0.5
HOXA6P31267 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXA6P31267 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.17■□□□□ 0.5
HOXA6P31267 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.17■□□□□ 0.5
HOXA6P31267 AL139424.1-201ENST00000607572 797 ntBASIC18.17■□□□□ 0.5
HOXA6P31267 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXA6P31267 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.17■□□□□ 0.5
HOXA6P31267 AC009102.3-201ENST00000623118 1491 ntBASIC18.17■□□□□ 0.5
HOXA6P31267 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms