Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NFKB1P19838 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.8■□□□□ 0.6
NFKB1P19838 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.8■□□□□ 0.6
NFKB1P19838 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.8■□□□□ 0.6
NFKB1P19838 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.8■□□□□ 0.6
NFKB1P19838 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NFKB1P19838 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NFKB1P19838 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.8■□□□□ 0.6
NFKB1P19838 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.8■□□□□ 0.6
NFKB1P19838 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.8■□□□□ 0.6
NFKB1P19838 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NFKB1P19838 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NFKB1P19838 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NFKB1P19838 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.8■□□□□ 0.6
NFKB1P19838 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NFKB1P19838 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NFKB1P19838 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFKB1P19838 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFKB1P19838 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NFKB1P19838 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.79■□□□□ 0.6
NFKB1P19838 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
NFKB1P19838 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NFKB1P19838 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NFKB1P19838 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.79■□□□□ 0.6
NFKB1P19838 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NFKB1P19838 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFKB1P19838 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.79■□□□□ 0.6
NFKB1P19838 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.79■□□□□ 0.6
NFKB1P19838 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NFKB1P19838 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
NFKB1P19838 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFKB1P19838 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFKB1P19838 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NFKB1P19838 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.79■□□□□ 0.6
NFKB1P19838 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFKB1P19838 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.79■□□□□ 0.6
NFKB1P19838 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NFKB1P19838 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.79■□□□□ 0.6
NFKB1P19838 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFKB1P19838 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NFKB1P19838 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.78■□□□□ 0.6
NFKB1P19838 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.78■□□□□ 0.6
NFKB1P19838 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.78■□□□□ 0.6
NFKB1P19838 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.78■□□□□ 0.6
NFKB1P19838 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 HMGA1P5-201ENST00000412453 271 ntBASIC18.78■□□□□ 0.6
NFKB1P19838 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.78■□□□□ 0.6
NFKB1P19838 AC009947.2-201ENST00000444014 672 ntBASIC18.78■□□□□ 0.6
NFKB1P19838 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.78■□□□□ 0.6
NFKB1P19838 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.78■□□□□ 0.6
NFKB1P19838 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.78■□□□□ 0.6
NFKB1P19838 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.78■□□□□ 0.6
NFKB1P19838 AC112497.1-201ENST00000624824 639 ntBASIC18.78■□□□□ 0.6
NFKB1P19838 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.78■□□□□ 0.6
NFKB1P19838 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.78■□□□□ 0.6
NFKB1P19838 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 AC135776.1-201ENST00000319817 2481 ntBASIC18.78■□□□□ 0.6
NFKB1P19838 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.78■□□□□ 0.6
NFKB1P19838 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFKB1P19838 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NFKB1P19838 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NFKB1P19838 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.77■□□□□ 0.6
NFKB1P19838 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.77■□□□□ 0.6
NFKB1P19838 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
NFKB1P19838 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 AL162741.1-201ENST00000565563 1558 ntBASIC18.77■□□□□ 0.6
NFKB1P19838 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NFKB1P19838 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.77■□□□□ 0.6
NFKB1P19838 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
NFKB1P19838 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
NFKB1P19838 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.77■□□□□ 0.6
NFKB1P19838 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms