Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 FAAHP1-202ENST00000446499 1238 ntBASIC21.36■■□□□ 1.01
ERCC3P19447 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
ERCC3P19447 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ERCC3P19447 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.36■■□□□ 1.01
ERCC3P19447 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.36■■□□□ 1.01
ERCC3P19447 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.36■■□□□ 1.01
ERCC3P19447 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.36■■□□□ 1.01
ERCC3P19447 AL732292.2-201ENST00000609649 430 ntBASIC21.36■■□□□ 1.01
ERCC3P19447 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ERCC3P19447 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
ERCC3P19447 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
ERCC3P19447 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.36■■□□□ 1.01
ERCC3P19447 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.36■■□□□ 1.01
ERCC3P19447 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ERCC3P19447 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ERCC3P19447 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ERCC3P19447 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.36■■□□□ 1.01
ERCC3P19447 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.36■■□□□ 1.01
ERCC3P19447 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.36■■□□□ 1.01
ERCC3P19447 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ERCC3P19447 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.36■■□□□ 1.01
ERCC3P19447 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.35■■□□□ 1.01
ERCC3P19447 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.35■■□□□ 1.01
ERCC3P19447 TSPY19P-201ENST00000418461 509 ntBASIC21.35■■□□□ 1.01
ERCC3P19447 TSPY18P-201ENST00000441642 509 ntBASIC21.35■■□□□ 1.01
ERCC3P19447 KRT17P6-201ENST00000453795 1220 ntBASIC21.35■■□□□ 1.01
ERCC3P19447 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.35■■□□□ 1.01
ERCC3P19447 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.35■■□□□ 1.01
ERCC3P19447 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.35■■□□□ 1.01
ERCC3P19447 AC005332.3-201ENST00000589904 676 ntBASIC21.35■■□□□ 1.01
ERCC3P19447 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
ERCC3P19447 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
ERCC3P19447 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.35■■□□□ 1.01
ERCC3P19447 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC3P19447 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
ERCC3P19447 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC3P19447 IRX1P1-201ENST00000438849 1838 ntBASIC21.34■■□□□ 1.01
ERCC3P19447 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.34■■□□□ 1.01
ERCC3P19447 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
ERCC3P19447 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC3P19447 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC3P19447 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
ERCC3P19447 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
ERCC3P19447 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC3P19447 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.34■■□□□ 1.01
ERCC3P19447 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
ERCC3P19447 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC3P19447 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC3P19447 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.34■■□□□ 1.01
ERCC3P19447 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
ERCC3P19447 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.34■■□□□ 1.01
ERCC3P19447 TOB2P1-201ENST00000469761 992 ntBASIC21.34■■□□□ 1.01
ERCC3P19447 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.34■■□□□ 1.01
ERCC3P19447 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.34■■□□□ 1.01
ERCC3P19447 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
ERCC3P19447 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC3P19447 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.34■■□□□ 1.01
ERCC3P19447 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC3P19447 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.34■■□□□ 1.01
ERCC3P19447 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC3P19447 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC3P19447 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
ERCC3P19447 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC3P19447 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC3P19447 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
ERCC3P19447 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC3P19447 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC3P19447 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC3P19447 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC3P19447 KRT8P10-201ENST00000450021 1447 ntBASIC21.33■■□□□ 1.01
ERCC3P19447 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC3P19447 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC3P19447 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC3P19447 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1.01
ERCC3P19447 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC3P19447 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC3P19447 PVRIG2P-201ENST00000435460 978 ntBASIC21.33■■□□□ 1.01
ERCC3P19447 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.33■■□□□ 1.01
ERCC3P19447 AP003733.1-201ENST00000491725 852 ntBASIC21.33■■□□□ 1.01
ERCC3P19447 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.33■■□□□ 1.01
ERCC3P19447 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.33■■□□□ 1.01
ERCC3P19447 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.33■■□□□ 1.01
ERCC3P19447 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
ERCC3P19447 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms