Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.26■□□□□ 0.51
NELFEP18615 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFEP18615 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.26■□□□□ 0.51
NELFEP18615 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFEP18615 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NELFEP18615 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NELFEP18615 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NELFEP18615 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.25■□□□□ 0.51
NELFEP18615 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NELFEP18615 SDHAP1-207ENST00000440850 2000 ntBASIC18.25■□□□□ 0.51
NELFEP18615 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NELFEP18615 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NELFEP18615 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
NELFEP18615 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
NELFEP18615 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NELFEP18615 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NELFEP18615 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
NELFEP18615 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.25■□□□□ 0.51
NELFEP18615 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NELFEP18615 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NELFEP18615 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
NELFEP18615 COX11P1-201ENST00000489116 835 ntBASIC18.25■□□□□ 0.51
NELFEP18615 AC063952.2-201ENST00000498792 1227 ntBASIC18.25■□□□□ 0.51
NELFEP18615 AC139887.4-201ENST00000607877 719 ntBASIC18.25■□□□□ 0.51
NELFEP18615 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NELFEP18615 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NELFEP18615 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
NELFEP18615 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NELFEP18615 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
NELFEP18615 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.25■□□□□ 0.51
NELFEP18615 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.25■□□□□ 0.51
NELFEP18615 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NELFEP18615 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NELFEP18615 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.24■□□□□ 0.51
NELFEP18615 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NELFEP18615 AC068880.1-201ENST00000507289 2297 ntBASIC18.24■□□□□ 0.51
NELFEP18615 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NELFEP18615 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.24■□□□□ 0.51
NELFEP18615 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NELFEP18615 RNF152P1-201ENST00000397754 604 ntBASIC18.24■□□□□ 0.51
NELFEP18615 TSPY23P-201ENST00000440136 739 ntBASIC18.24■□□□□ 0.51
NELFEP18615 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.24■□□□□ 0.51
NELFEP18615 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.24■□□□□ 0.51
NELFEP18615 YBX1P2-201ENST00000489612 999 ntBASIC18.24■□□□□ 0.51
NELFEP18615 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.24■□□□□ 0.51
NELFEP18615 LINC01238-205ENST00000567549 1107 ntBASIC18.24■□□□□ 0.51
NELFEP18615 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NELFEP18615 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NELFEP18615 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFEP18615 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.23■□□□□ 0.51
NELFEP18615 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFEP18615 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.23■□□□□ 0.51
NELFEP18615 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
NELFEP18615 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFEP18615 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFEP18615 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFEP18615 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFEP18615 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.23■□□□□ 0.51
NELFEP18615 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.23■□□□□ 0.51
NELFEP18615 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NELFEP18615 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.23■□□□□ 0.51
NELFEP18615 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.23■□□□□ 0.51
NELFEP18615 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NELFEP18615 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFEP18615 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFEP18615 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.23■□□□□ 0.51
NELFEP18615 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.23■□□□□ 0.51
NELFEP18615 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.23■□□□□ 0.51
NELFEP18615 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.23■□□□□ 0.51
NELFEP18615 AC022616.7-201ENST00000525383 220 ntBASIC18.23■□□□□ 0.51
NELFEP18615 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.23■□□□□ 0.51
NELFEP18615 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.23■□□□□ 0.51
NELFEP18615 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.23■□□□□ 0.51
NELFEP18615 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
NELFEP18615 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.23■□□□□ 0.51
NELFEP18615 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NELFEP18615 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFEP18615 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFEP18615 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.23■□□□□ 0.51
NELFEP18615 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms