Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.22■□□□□ 0.67
H2AFXP16104 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.22■□□□□ 0.67
H2AFXP16104 AC106739.1-201ENST00000617035 715 ntBASIC19.22■□□□□ 0.67
H2AFXP16104 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.22■□□□□ 0.67
H2AFXP16104 AC013268.1-206ENST00000638368 961 ntBASIC19.22■□□□□ 0.67
H2AFXP16104 AC112229.1-201ENST00000639295 961 ntBASIC19.22■□□□□ 0.67
H2AFXP16104 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2AFXP16104 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
H2AFXP16104 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2AFXP16104 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
H2AFXP16104 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2AFXP16104 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2AFXP16104 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.22■□□□□ 0.67
H2AFXP16104 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2AFXP16104 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2AFXP16104 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.22■□□□□ 0.67
H2AFXP16104 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2AFXP16104 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2AFXP16104 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.21■□□□□ 0.67
H2AFXP16104 PHGDH-209ENST00000641074 1780 ntBASIC19.21■□□□□ 0.67
H2AFXP16104 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.21■□□□□ 0.67
H2AFXP16104 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2AFXP16104 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
H2AFXP16104 KRT18P55-202ENST00000578578 1546 ntBASIC19.21■□□□□ 0.67
H2AFXP16104 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2AFXP16104 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2AFXP16104 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2AFXP16104 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2AFXP16104 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
H2AFXP16104 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
H2AFXP16104 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2AFXP16104 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
H2AFXP16104 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2AFXP16104 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
H2AFXP16104 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.21■□□□□ 0.67
H2AFXP16104 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.21■□□□□ 0.67
H2AFXP16104 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
H2AFXP16104 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
H2AFXP16104 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
H2AFXP16104 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2AFXP16104 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
H2AFXP16104 AP006587.1-201ENST00000534129 1502 ntBASIC19.2■□□□□ 0.66
H2AFXP16104 AL355312.1-201ENST00000407115 2176 ntBASIC19.2■□□□□ 0.66
H2AFXP16104 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.2■□□□□ 0.66
H2AFXP16104 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 MYLKP1-201ENST00000509077 1580 ntBASIC19.2■□□□□ 0.66
H2AFXP16104 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 AL589743.5-201ENST00000616611 1050 ntBASIC19.2■□□□□ 0.66
H2AFXP16104 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
H2AFXP16104 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
H2AFXP16104 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2AFXP16104 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
H2AFXP16104 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.2■□□□□ 0.66
H2AFXP16104 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2AFXP16104 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
H2AFXP16104 LINC02199-201ENST00000506655 2702 ntBASIC19.19■□□□□ 0.66
H2AFXP16104 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2AFXP16104 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
H2AFXP16104 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2AFXP16104 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2AFXP16104 KRT18P16-201ENST00000510337 1294 ntBASIC19.19■□□□□ 0.66
H2AFXP16104 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.19■□□□□ 0.66
H2AFXP16104 AL031432.3-201ENST00000607698 485 ntBASIC19.19■□□□□ 0.66
H2AFXP16104 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2AFXP16104 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2AFXP16104 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.19■□□□□ 0.66
H2AFXP16104 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
H2AFXP16104 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2AFXP16104 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
H2AFXP16104 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2AFXP16104 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
H2AFXP16104 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2AFXP16104 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2AFXP16104 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
H2AFXP16104 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
H2AFXP16104 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2AFXP16104 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
H2AFXP16104 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2AFXP16104 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
H2AFXP16104 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.18■□□□□ 0.66
H2AFXP16104 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2AFXP16104 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
H2AFXP16104 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.18■□□□□ 0.66
H2AFXP16104 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
H2AFXP16104 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
H2AFXP16104 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.18■□□□□ 0.66
H2AFXP16104 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.18■□□□□ 0.66
H2AFXP16104 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.18■□□□□ 0.66
H2AFXP16104 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms