Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VCANP13611 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.06■□□□□ 0.64
VCANP13611 MKNK2P1-201ENST00000437526 628 ntBASIC19.06■□□□□ 0.64
VCANP13611 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.06■□□□□ 0.64
VCANP13611 AL513190.1-201ENST00000621254 727 ntBASIC19.06■□□□□ 0.64
VCANP13611 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCANP13611 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.05■□□□□ 0.64
VCANP13611 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
VCANP13611 AL356309.3-201ENST00000624132 1934 ntBASIC19.05■□□□□ 0.64
VCANP13611 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCANP13611 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.05■□□□□ 0.64
VCANP13611 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.05■□□□□ 0.64
VCANP13611 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.05■□□□□ 0.64
VCANP13611 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VCANP13611 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
VCANP13611 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VCANP13611 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCANP13611 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.05■□□□□ 0.64
VCANP13611 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.05■□□□□ 0.64
VCANP13611 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.05■□□□□ 0.64
VCANP13611 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.05■□□□□ 0.64
VCANP13611 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCANP13611 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCANP13611 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VCANP13611 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.04■□□□□ 0.64
VCANP13611 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
VCANP13611 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.04■□□□□ 0.64
VCANP13611 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.04■□□□□ 0.64
VCANP13611 AC109322.1-201ENST00000524499 1264 ntBASIC19.04■□□□□ 0.64
VCANP13611 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.04■□□□□ 0.64
VCANP13611 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.04■□□□□ 0.64
VCANP13611 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
VCANP13611 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VCANP13611 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.04■□□□□ 0.64
VCANP13611 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.04■□□□□ 0.64
VCANP13611 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.04■□□□□ 0.64
VCANP13611 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.04■□□□□ 0.64
VCANP13611 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.04■□□□□ 0.64
VCANP13611 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.04■□□□□ 0.64
VCANP13611 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.04■□□□□ 0.64
VCANP13611 AC007225.1-201ENST00000566331 1836 ntBASIC19.04■□□□□ 0.64
VCANP13611 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.04■□□□□ 0.64
VCANP13611 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
VCANP13611 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.04■□□□□ 0.64
VCANP13611 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCANP13611 AC107918.4-202ENST00000641623 219 ntBASIC19.04■□□□□ 0.64
VCANP13611 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.03■□□□□ 0.64
VCANP13611 AP002414.3-201ENST00000589352 1468 ntBASIC19.03■□□□□ 0.64
VCANP13611 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VCANP13611 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCANP13611 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCANP13611 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
VCANP13611 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.03■□□□□ 0.64
VCANP13611 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VCANP13611 AL049796.1-201ENST00000565336 1766 ntBASIC19.03■□□□□ 0.64
VCANP13611 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.03■□□□□ 0.64
VCANP13611 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.03■□□□□ 0.64
VCANP13611 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.03■□□□□ 0.64
VCANP13611 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.03■□□□□ 0.64
VCANP13611 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.03■□□□□ 0.64
VCANP13611 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.03■□□□□ 0.64
VCANP13611 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.03■□□□□ 0.64
VCANP13611 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.03■□□□□ 0.64
VCANP13611 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.03■□□□□ 0.64
VCANP13611 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.03■□□□□ 0.64
VCANP13611 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.03■□□□□ 0.64
VCANP13611 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VCANP13611 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VCANP13611 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VCANP13611 AC236430.1-201ENST00000402231 743 ntBASIC19.02■□□□□ 0.64
VCANP13611 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.02■□□□□ 0.64
VCANP13611 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.02■□□□□ 0.64
VCANP13611 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.02■□□□□ 0.64
VCANP13611 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
VCANP13611 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
VCANP13611 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VCANP13611 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
VCANP13611 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.02■□□□□ 0.64
VCANP13611 HOXB1-202ENST00000577092 1414 ntBASIC19.02■□□□□ 0.64
VCANP13611 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VCANP13611 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.02■□□□□ 0.64
VCANP13611 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VCANP13611 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.02■□□□□ 0.63
VCANP13611 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.02■□□□□ 0.63
VCANP13611 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms