Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.38■□□□□ 0.85
TPM1P09493 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM1P09493 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM1P09493 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM1P09493 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM1P09493 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TPM1P09493 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM1P09493 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM1P09493 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM1P09493 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM1P09493 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM1P09493 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TPM1P09493 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM1P09493 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM1P09493 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
TPM1P09493 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM1P09493 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 KRT8P32-201ENST00000512863 1461 ntBASIC20.37■□□□□ 0.85
TPM1P09493 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TPM1P09493 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM1P09493 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM1P09493 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM1P09493 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM1P09493 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.37■□□□□ 0.85
TPM1P09493 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM1P09493 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM1P09493 AC133041.1-202ENST00000642053 222 ntBASIC20.37■□□□□ 0.85
TPM1P09493 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
TPM1P09493 AC135776.1-201ENST00000319817 2481 ntBASIC20.37■□□□□ 0.85
TPM1P09493 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TPM1P09493 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM1P09493 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TPM1P09493 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM1P09493 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM1P09493 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.36■□□□□ 0.85
TPM1P09493 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM1P09493 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
TPM1P09493 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM1P09493 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM1P09493 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.36■□□□□ 0.85
TPM1P09493 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM1P09493 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.36■□□□□ 0.85
TPM1P09493 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM1P09493 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM1P09493 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.36■□□□□ 0.85
TPM1P09493 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
TPM1P09493 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TPM1P09493 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.36■□□□□ 0.85
TPM1P09493 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TPM1P09493 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.36■□□□□ 0.85
TPM1P09493 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.36■□□□□ 0.85
TPM1P09493 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM1P09493 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TPM1P09493 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM1P09493 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TPM1P09493 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.36■□□□□ 0.85
TPM1P09493 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM1P09493 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM1P09493 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM1P09493 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.36■□□□□ 0.85
TPM1P09493 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TPM1P09493 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM1P09493 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TPM1P09493 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM1P09493 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.35■□□□□ 0.85
TPM1P09493 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM1P09493 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TPM1P09493 GNAS-203ENST00000306120 1878 ntBASIC20.35■□□□□ 0.85
TPM1P09493 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM1P09493 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM1P09493 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM1P09493 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM1P09493 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM1P09493 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.35■□□□□ 0.85
TPM1P09493 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.35■□□□□ 0.85
TPM1P09493 PRSS44-201ENST00000515154 1146 ntBASIC20.35■□□□□ 0.85
TPM1P09493 AC098934.4-201ENST00000564127 592 ntBASIC20.35■□□□□ 0.85
TPM1P09493 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TPM1P09493 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM1P09493 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TPM1P09493 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.35■□□□□ 0.85
TPM1P09493 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.35■□□□□ 0.85
TPM1P09493 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TPM1P09493 KRT8P45-201ENST00000414328 1447 ntBASIC20.35■□□□□ 0.85
TPM1P09493 KRT8P3-201ENST00000519669 1449 ntBASIC20.35■□□□□ 0.85
TPM1P09493 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms