Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.74■□□□□ 0.91
TPM3P06753 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.74■□□□□ 0.91
TPM3P06753 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
TPM3P06753 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
TPM3P06753 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TPM3P06753 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TPM3P06753 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 SLC29A4P1-201ENST00000398760 971 ntBASIC20.73■□□□□ 0.91
TPM3P06753 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.73■□□□□ 0.91
TPM3P06753 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.73■□□□□ 0.91
TPM3P06753 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.73■□□□□ 0.91
TPM3P06753 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.73■□□□□ 0.91
TPM3P06753 MIR4758-201ENST00000577688 71 ntBASIC20.73■□□□□ 0.91
TPM3P06753 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.73■□□□□ 0.91
TPM3P06753 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
TPM3P06753 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TPM3P06753 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM3P06753 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.73■□□□□ 0.91
TPM3P06753 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.73■□□□□ 0.91
TPM3P06753 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TPM3P06753 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.72■□□□□ 0.91
TPM3P06753 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.72■□□□□ 0.91
TPM3P06753 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TPM3P06753 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TPM3P06753 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TPM3P06753 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.72■□□□□ 0.91
TPM3P06753 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.72■□□□□ 0.91
TPM3P06753 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TPM3P06753 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.72■□□□□ 0.91
TPM3P06753 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.72■□□□□ 0.91
TPM3P06753 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.72■□□□□ 0.91
TPM3P06753 AC093677.2-201ENST00000600169 1863 ntBASIC20.72■□□□□ 0.91
TPM3P06753 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.72■□□□□ 0.91
TPM3P06753 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TPM3P06753 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 CROCCP1-201ENST00000426910 5675 ntBASIC20.72■□□□□ 0.91
TPM3P06753 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM3P06753 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
TPM3P06753 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TPM3P06753 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TPM3P06753 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TPM3P06753 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TPM3P06753 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TPM3P06753 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.71■□□□□ 0.91
TPM3P06753 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.71■□□□□ 0.91
TPM3P06753 AC083906.2-201ENST00000511578 360 ntBASIC20.71■□□□□ 0.91
TPM3P06753 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TPM3P06753 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.71■□□□□ 0.91
TPM3P06753 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TPM3P06753 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TPM3P06753 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.71■□□□□ 0.91
TPM3P06753 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.71■□□□□ 0.91
TPM3P06753 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.71■□□□□ 0.91
TPM3P06753 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TPM3P06753 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
TPM3P06753 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.7■□□□□ 0.9
TPM3P06753 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.7■□□□□ 0.9
TPM3P06753 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms