Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 FAM197Y4-202ENST00000622692 608 ntBASIC16.63■□□□□ 0.25
HLA-DPB1P04440 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.63■□□□□ 0.25
HLA-DPB1P04440 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 AC110285.5-201ENST00000611501 352 ntBASIC16.62■□□□□ 0.25
HLA-DPB1P04440 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 AL359736.2-201ENST00000621992 437 ntBASIC16.62■□□□□ 0.25
HLA-DPB1P04440 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 AC135776.1-201ENST00000319817 2481 ntBASIC16.62■□□□□ 0.25
HLA-DPB1P04440 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPB1P04440 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 AL158047.1-201ENST00000445918 881 ntBASIC16.61■□□□□ 0.25
HLA-DPB1P04440 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 AC133681.1-201ENST00000465482 601 ntBASIC16.61■□□□□ 0.25
HLA-DPB1P04440 AC098590.1-201ENST00000468126 897 ntBASIC16.61■□□□□ 0.25
HLA-DPB1P04440 AC142381.4-202ENST00000563973 229 ntBASIC16.61■□□□□ 0.25
HLA-DPB1P04440 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 HEIH-201ENST00000623091 1652 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms