Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.94■□□□□ 0.78
TIMP1P01033 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TIMP1P01033 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
TIMP1P01033 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.93■□□□□ 0.78
TIMP1P01033 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TIMP1P01033 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TIMP1P01033 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.93■□□□□ 0.78
TIMP1P01033 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
TIMP1P01033 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.93■□□□□ 0.78
TIMP1P01033 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
TIMP1P01033 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.93■□□□□ 0.78
TIMP1P01033 AC025062.2-201ENST00000605477 670 ntBASIC19.93■□□□□ 0.78
TIMP1P01033 AC008735.5-201ENST00000623544 497 ntBASIC19.93■□□□□ 0.78
TIMP1P01033 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TIMP1P01033 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TIMP1P01033 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TIMP1P01033 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.93■□□□□ 0.78
TIMP1P01033 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
TIMP1P01033 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.93■□□□□ 0.78
TIMP1P01033 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TIMP1P01033 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TIMP1P01033 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.92■□□□□ 0.78
TIMP1P01033 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TIMP1P01033 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TIMP1P01033 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TIMP1P01033 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
TIMP1P01033 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TIMP1P01033 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.92■□□□□ 0.78
TIMP1P01033 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TIMP1P01033 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TIMP1P01033 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TIMP1P01033 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TIMP1P01033 MIR149-201ENST00000384879 89 ntBASIC19.92■□□□□ 0.78
TIMP1P01033 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.92■□□□□ 0.78
TIMP1P01033 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.92■□□□□ 0.78
TIMP1P01033 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
TIMP1P01033 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.92■□□□□ 0.78
TIMP1P01033 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TIMP1P01033 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TIMP1P01033 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TIMP1P01033 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TIMP1P01033 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TIMP1P01033 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.92■□□□□ 0.78
TIMP1P01033 AC125634.1-201ENST00000438758 1403 ntBASIC19.92■□□□□ 0.78
TIMP1P01033 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
TIMP1P01033 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TIMP1P01033 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TIMP1P01033 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.91■□□□□ 0.78
TIMP1P01033 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TIMP1P01033 HEIH-201ENST00000623091 1652 ntBASIC19.91■□□□□ 0.78
TIMP1P01033 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TIMP1P01033 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.91■□□□□ 0.78
TIMP1P01033 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TIMP1P01033 AC004832.2-201ENST00000426397 482 ntBASIC19.91■□□□□ 0.78
TIMP1P01033 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.91■□□□□ 0.78
TIMP1P01033 MTCL1P1-201ENST00000446207 792 ntBASIC19.91■□□□□ 0.78
TIMP1P01033 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.91■□□□□ 0.78
TIMP1P01033 RNA5SP416-201ENST00000516838 111 ntBASIC19.91■□□□□ 0.78
TIMP1P01033 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.91■□□□□ 0.78
TIMP1P01033 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.91■□□□□ 0.78
TIMP1P01033 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.91■□□□□ 0.78
TIMP1P01033 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TIMP1P01033 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TIMP1P01033 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TIMP1P01033 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.91■□□□□ 0.78
TIMP1P01033 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.91■□□□□ 0.78
TIMP1P01033 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TIMP1P01033 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TIMP1P01033 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TIMP1P01033 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TIMP1P01033 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.91■□□□□ 0.78
TIMP1P01033 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
TIMP1P01033 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.91■□□□□ 0.78
TIMP1P01033 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.9■□□□□ 0.78
TIMP1P01033 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.9■□□□□ 0.78
TIMP1P01033 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.9■□□□□ 0.78
TIMP1P01033 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TIMP1P01033 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TIMP1P01033 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TIMP1P01033 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TIMP1P01033 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TIMP1P01033 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TIMP1P01033 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TIMP1P01033 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TIMP1P01033 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TIMP1P01033 UNC93B6-202ENST00000528242 690 ntBASIC19.9■□□□□ 0.78
TIMP1P01033 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
TIMP1P01033 AC105339.3-201ENST00000560043 636 ntBASIC19.9■□□□□ 0.78
TIMP1P01033 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.9■□□□□ 0.78
TIMP1P01033 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
TIMP1P01033 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TIMP1P01033 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TIMP1P01033 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.9■□□□□ 0.78
TIMP1P01033 AC009154.2-201ENST00000621177 724 ntBASIC19.9■□□□□ 0.78
TIMP1P01033 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.9■□□□□ 0.78
TIMP1P01033 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TIMP1P01033 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.9■□□□□ 0.78
TIMP1P01033 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TIMP1P01033 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TIMP1P01033 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms