Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.46■□□□□ 0.39
CLPTM1O96005 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLPTM1O96005 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLPTM1O96005 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.46■□□□□ 0.39
CLPTM1O96005 AC097658.1-201ENST00000475555 843 ntBASIC17.46■□□□□ 0.39
CLPTM1O96005 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.46■□□□□ 0.39
CLPTM1O96005 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.46■□□□□ 0.39
CLPTM1O96005 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.46■□□□□ 0.39
CLPTM1O96005 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CLPTM1O96005 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLPTM1O96005 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.46■□□□□ 0.39
CLPTM1O96005 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.46■□□□□ 0.39
CLPTM1O96005 AL391005.1-201ENST00000623953 2435 ntBASIC17.46■□□□□ 0.38
CLPTM1O96005 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLPTM1O96005 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLPTM1O96005 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLPTM1O96005 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLPTM1O96005 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLPTM1O96005 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLPTM1O96005 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPTM1O96005 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPTM1O96005 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPTM1O96005 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLPTM1O96005 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPTM1O96005 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPTM1O96005 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLPTM1O96005 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPTM1O96005 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CLPTM1O96005 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.45■□□□□ 0.38
CLPTM1O96005 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.45■□□□□ 0.38
CLPTM1O96005 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLPTM1O96005 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.45■□□□□ 0.38
CLPTM1O96005 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.45■□□□□ 0.38
CLPTM1O96005 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.45■□□□□ 0.38
CLPTM1O96005 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPTM1O96005 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPTM1O96005 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPTM1O96005 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.45■□□□□ 0.38
CLPTM1O96005 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPTM1O96005 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CLPTM1O96005 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLPTM1O96005 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CLPTM1O96005 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.44■□□□□ 0.38
CLPTM1O96005 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLPTM1O96005 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.44■□□□□ 0.38
CLPTM1O96005 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CLPTM1O96005 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLPTM1O96005 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.44■□□□□ 0.38
CLPTM1O96005 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.44■□□□□ 0.38
CLPTM1O96005 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.44■□□□□ 0.38
CLPTM1O96005 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.44■□□□□ 0.38
CLPTM1O96005 AC083880.1-201ENST00000608266 535 ntBASIC17.44■□□□□ 0.38
CLPTM1O96005 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.44■□□□□ 0.38
CLPTM1O96005 MYC-209ENST00000641252 345 ntBASIC17.44■□□□□ 0.38
CLPTM1O96005 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CLPTM1O96005 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.44■□□□□ 0.38
CLPTM1O96005 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CLPTM1O96005 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLPTM1O96005 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPTM1O96005 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLPTM1O96005 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.43■□□□□ 0.38
CLPTM1O96005 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.43■□□□□ 0.38
CLPTM1O96005 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLPTM1O96005 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CLPTM1O96005 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLPTM1O96005 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLPTM1O96005 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CLPTM1O96005 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.43■□□□□ 0.38
CLPTM1O96005 CICP6-201ENST00000457191 2729 ntBASIC17.43■□□□□ 0.38
CLPTM1O96005 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms