Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
PCF11O94913 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC28.74■■■□□ 2.19
PCF11O94913 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC28.73■■■□□ 2.19
PCF11O94913 COBL-210ENST00000632460 1941 ntTSL 5 BASIC28.73■■■□□ 2.19
PCF11O94913 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PCF11O94913 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC28.73■■■□□ 2.19
PCF11O94913 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
PCF11O94913 ASL-204ENST00000395331 1538 ntTSL 5 BASIC28.73■■■□□ 2.19
PCF11O94913 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PCF11O94913 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PCF11O94913 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC28.73■■■□□ 2.19
PCF11O94913 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PCF11O94913 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PCF11O94913 AC079776.4-201ENST00000511039 504 ntBASIC28.73■■■□□ 2.19
PCF11O94913 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC28.73■■■□□ 2.19
PCF11O94913 MIR7706-201ENST00000613747 67 ntBASIC28.73■■■□□ 2.19
PCF11O94913 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
PCF11O94913 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PCF11O94913 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
PCF11O94913 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
PCF11O94913 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PCF11O94913 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
PCF11O94913 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC28.72■■■□□ 2.19
PCF11O94913 LSM5-204ENST00000409909 740 ntTSL 2 BASIC28.72■■■□□ 2.19
PCF11O94913 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
PCF11O94913 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC28.72■■■□□ 2.19
PCF11O94913 RNA5SP419-201ENST00000515908 135 ntBASIC28.72■■■□□ 2.19
PCF11O94913 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC28.72■■■□□ 2.19
PCF11O94913 AL121912.1-201ENST00000603683 238 ntBASIC28.72■■■□□ 2.19
PCF11O94913 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PCF11O94913 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PCF11O94913 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC28.72■■■□□ 2.19
PCF11O94913 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC28.72■■■□□ 2.19
PCF11O94913 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PCF11O94913 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PCF11O94913 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
PCF11O94913 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
PCF11O94913 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC28.71■■■□□ 2.19
PCF11O94913 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC28.71■■■□□ 2.19
PCF11O94913 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC28.71■■■□□ 2.19
PCF11O94913 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC28.71■■■□□ 2.19
PCF11O94913 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
PCF11O94913 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
PCF11O94913 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
PCF11O94913 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
PCF11O94913 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC28.71■■■□□ 2.19
PCF11O94913 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
PCF11O94913 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
PCF11O94913 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
PCF11O94913 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC28.71■■■□□ 2.19
PCF11O94913 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC28.71■■■□□ 2.19
PCF11O94913 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PCF11O94913 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC28.71■■■□□ 2.19
PCF11O94913 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC28.71■■■□□ 2.19
PCF11O94913 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
PCF11O94913 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC28.71■■■□□ 2.19
PCF11O94913 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC28.71■■■□□ 2.19
PCF11O94913 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC28.71■■■□□ 2.19
PCF11O94913 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC28.71■■■□□ 2.19
PCF11O94913 AC114341.1-201ENST00000618070 349 ntBASIC28.71■■■□□ 2.19
PCF11O94913 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
PCF11O94913 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC28.7■■■□□ 2.19
PCF11O94913 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC28.7■■■□□ 2.19
PCF11O94913 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PCF11O94913 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
PCF11O94913 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC28.7■■■□□ 2.18
PCF11O94913 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PCF11O94913 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
PCF11O94913 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
PCF11O94913 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PCF11O94913 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PCF11O94913 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PCF11O94913 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
PCF11O94913 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
PCF11O94913 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PCF11O94913 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC28.69■■■□□ 2.18
PCF11O94913 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC28.69■■■□□ 2.18
PCF11O94913 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC28.69■■■□□ 2.18
PCF11O94913 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PCF11O94913 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PCF11O94913 VPS51-217ENST00000639871 243 ntTSL 5 BASIC28.69■■■□□ 2.18
PCF11O94913 ANKRD20A8P-203ENST00000641373 517 ntBASIC28.69■■■□□ 2.18
PCF11O94913 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCF11O94913 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCF11O94913 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCF11O94913 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC28.68■■■□□ 2.18
PCF11O94913 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
PCF11O94913 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCF11O94913 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCF11O94913 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC28.68■■■□□ 2.18
PCF11O94913 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCF11O94913 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCF11O94913 AF238378.1-201ENST00000526806 358 ntBASIC28.68■■■□□ 2.18
PCF11O94913 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
PCF11O94913 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PCF11O94913 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PCF11O94913 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCF11O94913 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCF11O94913 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC28.67■■■□□ 2.18
PCF11O94913 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms