Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.51■□□□□ 0.87
LGR5O75473 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.51■□□□□ 0.87
LGR5O75473 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.51■□□□□ 0.87
LGR5O75473 AC090616.6-201ENST00000582640 721 ntBASIC20.51■□□□□ 0.87
LGR5O75473 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LGR5O75473 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.51■□□□□ 0.87
LGR5O75473 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
LGR5O75473 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LGR5O75473 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.51■□□□□ 0.87
LGR5O75473 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.51■□□□□ 0.87
LGR5O75473 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.51■□□□□ 0.87
LGR5O75473 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.51■□□□□ 0.87
LGR5O75473 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LGR5O75473 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LGR5O75473 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LGR5O75473 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LGR5O75473 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LGR5O75473 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LGR5O75473 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.5■□□□□ 0.87
LGR5O75473 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.5■□□□□ 0.87
LGR5O75473 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.5■□□□□ 0.87
LGR5O75473 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LGR5O75473 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.5■□□□□ 0.87
LGR5O75473 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.5■□□□□ 0.87
LGR5O75473 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LGR5O75473 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.5■□□□□ 0.87
LGR5O75473 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.5■□□□□ 0.87
LGR5O75473 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.5■□□□□ 0.87
LGR5O75473 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.5■□□□□ 0.87
LGR5O75473 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LGR5O75473 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.5■□□□□ 0.87
LGR5O75473 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LGR5O75473 KRT8P10-201ENST00000450021 1447 ntBASIC20.5■□□□□ 0.87
LGR5O75473 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LGR5O75473 MYLKP1-201ENST00000509077 1580 ntBASIC20.5■□□□□ 0.87
LGR5O75473 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.5■□□□□ 0.87
LGR5O75473 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LGR5O75473 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LGR5O75473 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.49■□□□□ 0.87
LGR5O75473 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LGR5O75473 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LGR5O75473 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LGR5O75473 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LGR5O75473 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.49■□□□□ 0.87
LGR5O75473 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.49■□□□□ 0.87
LGR5O75473 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.49■□□□□ 0.87
LGR5O75473 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.49■□□□□ 0.87
LGR5O75473 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.49■□□□□ 0.87
LGR5O75473 IFNL4P1-201ENST00000607083 540 ntBASIC20.49■□□□□ 0.87
LGR5O75473 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LGR5O75473 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.49■□□□□ 0.87
LGR5O75473 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LGR5O75473 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LGR5O75473 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.49■□□□□ 0.87
LGR5O75473 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LGR5O75473 AC009102.3-201ENST00000623118 1491 ntBASIC20.49■□□□□ 0.87
LGR5O75473 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LGR5O75473 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LGR5O75473 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LGR5O75473 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LGR5O75473 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LGR5O75473 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
LGR5O75473 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LGR5O75473 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LGR5O75473 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LGR5O75473 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.48■□□□□ 0.87
LGR5O75473 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.48■□□□□ 0.87
LGR5O75473 RN7SL606P-201ENST00000472779 293 ntBASIC20.48■□□□□ 0.87
LGR5O75473 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LGR5O75473 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.48■□□□□ 0.87
LGR5O75473 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.48■□□□□ 0.87
LGR5O75473 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LGR5O75473 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LGR5O75473 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LGR5O75473 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
LGR5O75473 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LGR5O75473 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.48■□□□□ 0.87
LGR5O75473 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LGR5O75473 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
LGR5O75473 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGR5O75473 AL353692.3-201ENST00000407031 1396 ntBASIC20.47■□□□□ 0.87
LGR5O75473 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGR5O75473 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.47■□□□□ 0.87
LGR5O75473 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LGR5O75473 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.47■□□□□ 0.87
LGR5O75473 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LGR5O75473 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LGR5O75473 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
LGR5O75473 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGR5O75473 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGR5O75473 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGR5O75473 TSPY19P-201ENST00000418461 509 ntBASIC20.47■□□□□ 0.87
LGR5O75473 TSPY18P-201ENST00000441642 509 ntBASIC20.47■□□□□ 0.87
LGR5O75473 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms