Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM3O75382 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 AC135050.7-201ENST00000624508 2218 ntBASIC17.24■□□□□ 0.35
TRIM3O75382 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM3O75382 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRIM3O75382 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM3O75382 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 MIR1224-201ENST00000408193 85 ntBASIC17.23■□□□□ 0.35
TRIM3O75382 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
TRIM3O75382 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM3O75382 BX664615.1-201ENST00000443558 458 ntBASIC17.23■□□□□ 0.35
TRIM3O75382 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 MIR4674-201ENST00000582457 87 ntBASIC17.23■□□□□ 0.35
TRIM3O75382 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM3O75382 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM3O75382 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM3O75382 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM3O75382 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM3O75382 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM3O75382 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 IRX1P1-201ENST00000438849 1838 ntBASIC17.23■□□□□ 0.35
TRIM3O75382 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM3O75382 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM3O75382 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM3O75382 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM3O75382 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM3O75382 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM3O75382 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM3O75382 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM3O75382 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRIM3O75382 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM3O75382 AL161938.1-201ENST00000569833 2180 ntBASIC17.22■□□□□ 0.35
TRIM3O75382 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM3O75382 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.22■□□□□ 0.35
TRIM3O75382 PKD1P1-201ENST00000458669 6805 ntBASIC17.22■□□□□ 0.35
TRIM3O75382 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM3O75382 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM3O75382 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM3O75382 AC104076.2-201ENST00000448912 469 ntBASIC17.22■□□□□ 0.35
TRIM3O75382 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM3O75382 AC141257.4-201ENST00000634557 245 ntBASIC17.22■□□□□ 0.35
TRIM3O75382 AC136944.6-201ENST00000634818 245 ntBASIC17.22■□□□□ 0.35
TRIM3O75382 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRIM3O75382 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM3O75382 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM3O75382 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.22■□□□□ 0.35
TRIM3O75382 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM3O75382 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM3O75382 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM3O75382 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 KRT8P45-201ENST00000414328 1447 ntBASIC17.21■□□□□ 0.35
TRIM3O75382 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRIM3O75382 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TRIM3O75382 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRIM3O75382 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM3O75382 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 FP475955.4-201ENST00000623131 1990 ntBASIC17.21■□□□□ 0.35
TRIM3O75382 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM3O75382 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
TRIM3O75382 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM3O75382 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM3O75382 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.21■□□□□ 0.35
TRIM3O75382 AC010331.1-201ENST00000611423 582 ntBASIC17.21■□□□□ 0.35
TRIM3O75382 AC006011.2-201ENST00000621313 1158 ntBASIC17.21■□□□□ 0.35
TRIM3O75382 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms