Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SH2D1AO60880 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.85□□□□□ -0.19
SH2D1AO60880 AC008556.1-201ENST00000610908 2040 ntBASIC13.85□□□□□ -0.19
SH2D1AO60880 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SH2D1AO60880 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SH2D1AO60880 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.84□□□□□ -0.19
SH2D1AO60880 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SH2D1AO60880 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SH2D1AO60880 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.84□□□□□ -0.19
SH2D1AO60880 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SH2D1AO60880 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SH2D1AO60880 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 PRKY-204ENST00000533551 1019 ntBASIC13.84□□□□□ -0.19
SH2D1AO60880 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.84□□□□□ -0.19
SH2D1AO60880 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.84□□□□□ -0.19
SH2D1AO60880 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.84□□□□□ -0.19
SH2D1AO60880 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.84□□□□□ -0.19
SH2D1AO60880 MYC-209ENST00000641252 345 ntBASIC13.84□□□□□ -0.19
SH2D1AO60880 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.84□□□□□ -0.19
SH2D1AO60880 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
SH2D1AO60880 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SH2D1AO60880 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
SH2D1AO60880 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.84□□□□□ -0.19
SH2D1AO60880 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.84□□□□□ -0.19
SH2D1AO60880 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SH2D1AO60880 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.84□□□□□ -0.19
SH2D1AO60880 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
SH2D1AO60880 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SH2D1AO60880 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
SH2D1AO60880 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SH2D1AO60880 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SH2D1AO60880 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.83□□□□□ -0.2
SH2D1AO60880 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.83□□□□□ -0.2
SH2D1AO60880 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
SH2D1AO60880 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SH2D1AO60880 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SH2D1AO60880 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SH2D1AO60880 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SH2D1AO60880 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SH2D1AO60880 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.83□□□□□ -0.2
SH2D1AO60880 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SH2D1AO60880 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.83□□□□□ -0.2
SH2D1AO60880 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SH2D1AO60880 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.83□□□□□ -0.2
SH2D1AO60880 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SH2D1AO60880 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SH2D1AO60880 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SH2D1AO60880 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.83□□□□□ -0.2
SH2D1AO60880 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SH2D1AO60880 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SH2D1AO60880 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.83□□□□□ -0.2
SH2D1AO60880 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SH2D1AO60880 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SH2D1AO60880 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.83□□□□□ -0.2
SH2D1AO60880 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SH2D1AO60880 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SH2D1AO60880 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SH2D1AO60880 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SH2D1AO60880 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SH2D1AO60880 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SH2D1AO60880 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SH2D1AO60880 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SH2D1AO60880 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.82□□□□□ -0.2
SH2D1AO60880 NBPF21P-201ENST00000425093 1451 ntBASIC13.82□□□□□ -0.2
SH2D1AO60880 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SH2D1AO60880 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SH2D1AO60880 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SH2D1AO60880 SIRPAP1-201ENST00000448467 1770 ntBASIC13.82□□□□□ -0.2
SH2D1AO60880 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.82□□□□□ -0.2
SH2D1AO60880 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SH2D1AO60880 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.82□□□□□ -0.2
SH2D1AO60880 POU5F1P3-201ENST00000428824 1078 ntBASIC13.82□□□□□ -0.2
SH2D1AO60880 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.82□□□□□ -0.2
SH2D1AO60880 AC006970.2-201ENST00000450065 779 ntBASIC13.82□□□□□ -0.2
SH2D1AO60880 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.82□□□□□ -0.2
SH2D1AO60880 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SH2D1AO60880 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.82□□□□□ -0.2
SH2D1AO60880 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.82□□□□□ -0.2
SH2D1AO60880 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms