Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HCN1O60741 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.29■□□□□ 0.36
HCN1O60741 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HCN1O60741 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCN1O60741 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCN1O60741 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.29■□□□□ 0.36
HCN1O60741 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCN1O60741 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.29■□□□□ 0.36
HCN1O60741 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HCN1O60741 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.29■□□□□ 0.36
HCN1O60741 BX664615.1-201ENST00000443558 458 ntBASIC17.29■□□□□ 0.36
HCN1O60741 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.29■□□□□ 0.36
HCN1O60741 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HCN1O60741 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
HCN1O60741 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.29■□□□□ 0.36
HCN1O60741 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.29■□□□□ 0.36
HCN1O60741 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.29■□□□□ 0.36
HCN1O60741 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HCN1O60741 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.29■□□□□ 0.36
HCN1O60741 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.29■□□□□ 0.36
HCN1O60741 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCN1O60741 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HCN1O60741 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
HCN1O60741 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HCN1O60741 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCN1O60741 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HCN1O60741 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCN1O60741 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HCN1O60741 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.29■□□□□ 0.36
HCN1O60741 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.28■□□□□ 0.36
HCN1O60741 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.28■□□□□ 0.36
HCN1O60741 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 AL512353.2-201ENST00000448759 1962 ntBASIC17.28■□□□□ 0.36
HCN1O60741 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
HCN1O60741 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
HCN1O60741 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HCN1O60741 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HCN1O60741 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.28■□□□□ 0.36
HCN1O60741 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.28■□□□□ 0.36
HCN1O60741 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.28■□□□□ 0.36
HCN1O60741 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.28■□□□□ 0.36
HCN1O60741 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.28■□□□□ 0.36
HCN1O60741 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.28■□□□□ 0.36
HCN1O60741 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HCN1O60741 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.28■□□□□ 0.36
HCN1O60741 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCN1O60741 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.27■□□□□ 0.36
HCN1O60741 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HCN1O60741 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HCN1O60741 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.27■□□□□ 0.36
HCN1O60741 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 TSPY21P-201ENST00000433481 731 ntBASIC17.27■□□□□ 0.36
HCN1O60741 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.27■□□□□ 0.36
HCN1O60741 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.27■□□□□ 0.36
HCN1O60741 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HCN1O60741 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCN1O60741 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.27■□□□□ 0.36
HCN1O60741 KRT8P11-201ENST00000409686 1436 ntBASIC17.27■□□□□ 0.35
HCN1O60741 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.27■□□□□ 0.35
HCN1O60741 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HCN1O60741 WIZP1-201ENST00000531444 2299 ntBASIC17.27■□□□□ 0.35
HCN1O60741 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.27■□□□□ 0.35
HCN1O60741 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HCN1O60741 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.27■□□□□ 0.35
HCN1O60741 AC009113.1-201ENST00000570267 2443 ntBASIC17.27■□□□□ 0.35
HCN1O60741 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
HCN1O60741 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HCN1O60741 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HCN1O60741 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCN1O60741 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
HCN1O60741 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCN1O60741 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCN1O60741 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCN1O60741 AP000997.3-201ENST00000623333 2250 ntBASIC17.26■□□□□ 0.35
HCN1O60741 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCN1O60741 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms