Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RRP8O43159 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RRP8O43159 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RRP8O43159 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RRP8O43159 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RRP8O43159 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RRP8O43159 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
RRP8O43159 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RRP8O43159 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RRP8O43159 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RRP8O43159 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RRP8O43159 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RRP8O43159 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RRP8O43159 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RRP8O43159 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RRP8O43159 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.34■□□□□ 0.37
RRP8O43159 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RRP8O43159 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.34■□□□□ 0.37
RRP8O43159 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RRP8O43159 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RRP8O43159 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.34■□□□□ 0.37
RRP8O43159 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.34■□□□□ 0.37
RRP8O43159 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.34■□□□□ 0.37
RRP8O43159 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RRP8O43159 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.34■□□□□ 0.37
RRP8O43159 AC132008.2-207ENST00000454517 770 ntBASIC17.34■□□□□ 0.37
RRP8O43159 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.34■□□□□ 0.37
RRP8O43159 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.34■□□□□ 0.37
RRP8O43159 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.34■□□□□ 0.37
RRP8O43159 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.34■□□□□ 0.37
RRP8O43159 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.34■□□□□ 0.37
RRP8O43159 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.34■□□□□ 0.37
RRP8O43159 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RRP8O43159 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.34■□□□□ 0.37
RRP8O43159 MIR7706-201ENST00000613747 67 ntBASIC17.34■□□□□ 0.37
RRP8O43159 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.34■□□□□ 0.37
RRP8O43159 FAM215A-202ENST00000632077 792 ntBASIC17.34■□□□□ 0.37
RRP8O43159 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RRP8O43159 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RRP8O43159 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RRP8O43159 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RRP8O43159 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RRP8O43159 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RRP8O43159 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.33■□□□□ 0.37
RRP8O43159 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RRP8O43159 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RRP8O43159 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RRP8O43159 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RRP8O43159 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.33■□□□□ 0.37
RRP8O43159 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RRP8O43159 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.33■□□□□ 0.37
RRP8O43159 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RRP8O43159 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RRP8O43159 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RRP8O43159 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RRP8O43159 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RRP8O43159 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RRP8O43159 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RRP8O43159 RPS8P6-201ENST00000426177 609 ntBASIC17.33■□□□□ 0.36
RRP8O43159 AL591424.1-201ENST00000442569 1213 ntBASIC17.33■□□□□ 0.36
RRP8O43159 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.33■□□□□ 0.36
RRP8O43159 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.33■□□□□ 0.36
RRP8O43159 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.33■□□□□ 0.36
RRP8O43159 AP001160.2-201ENST00000596071 487 ntBASIC17.33■□□□□ 0.36
RRP8O43159 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.33■□□□□ 0.36
RRP8O43159 AC114341.1-201ENST00000618070 349 ntBASIC17.33■□□□□ 0.36
RRP8O43159 FAM197Y3-203ENST00000618346 717 ntBASIC17.33■□□□□ 0.36
RRP8O43159 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RRP8O43159 AC055717.3-201ENST00000622967 595 ntBASIC17.33■□□□□ 0.36
RRP8O43159 AC116407.3-201ENST00000623905 1129 ntBASIC17.33■□□□□ 0.36
RRP8O43159 AFG3L1P-217ENST00000557444 2447 ntBASIC17.33■□□□□ 0.36
RRP8O43159 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RRP8O43159 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RRP8O43159 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RRP8O43159 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RRP8O43159 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.33■□□□□ 0.36
RRP8O43159 AL512408.1-201ENST00000569378 2000 ntBASIC17.33■□□□□ 0.36
RRP8O43159 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RRP8O43159 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RRP8O43159 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RRP8O43159 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RRP8O43159 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.33■□□□□ 0.36
RRP8O43159 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RRP8O43159 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.32■□□□□ 0.36
RRP8O43159 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RRP8O43159 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RRP8O43159 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.32■□□□□ 0.36
RRP8O43159 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RRP8O43159 RCC2P3-201ENST00000418112 1537 ntBASIC17.32■□□□□ 0.36
RRP8O43159 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RRP8O43159 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RRP8O43159 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RRP8O43159 AL391422.3-201ENST00000603791 2761 ntBASIC17.32■□□□□ 0.36
RRP8O43159 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RRP8O43159 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RRP8O43159 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RRP8O43159 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.32■□□□□ 0.36
RRP8O43159 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.32■□□□□ 0.36
RRP8O43159 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RRP8O43159 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms