Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 IGHV3-22-201ENST00000520721 359 ntBASIC21.1■□□□□ 0.97
LOC285556D6RIA3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 AC106730.1-201ENST00000566722 1090 ntBASIC21.1■□□□□ 0.97
LOC285556D6RIA3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.1■□□□□ 0.97
LOC285556D6RIA3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.1■□□□□ 0.97
LOC285556D6RIA3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 HNRNPDP1-201ENST00000439535 754 ntBASIC21.09■□□□□ 0.97
LOC285556D6RIA3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 AL049812.1-201ENST00000432563 2267 ntBASIC21.09■□□□□ 0.97
LOC285556D6RIA3 INTS4P1-201ENST00000438455 1935 ntBASIC21.09■□□□□ 0.97
LOC285556D6RIA3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.09■□□□□ 0.97
LOC285556D6RIA3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.08■□□□□ 0.97
LOC285556D6RIA3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.08■□□□□ 0.97
LOC285556D6RIA3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
LOC285556D6RIA3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LOC285556D6RIA3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
LOC285556D6RIA3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
LOC285556D6RIA3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LOC285556D6RIA3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.08■□□□□ 0.96
LOC285556D6RIA3 POLD2P1-201ENST00000511220 997 ntBASIC21.08■□□□□ 0.96
LOC285556D6RIA3 MIR5100-201ENST00000579544 119 ntBASIC21.08■□□□□ 0.96
LOC285556D6RIA3 AC008687.5-201ENST00000593746 558 ntBASIC21.08■□□□□ 0.96
LOC285556D6RIA3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
LOC285556D6RIA3 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.07■□□□□ 0.96
LOC285556D6RIA3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 AFG3L1P-217ENST00000557444 2447 ntBASIC21.07■□□□□ 0.96
LOC285556D6RIA3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 TP73-AS1-210ENST00000637775 1455 ntBASIC21.07■□□□□ 0.96
LOC285556D6RIA3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 SDHAP2-201ENST00000455183 2001 ntBASIC21.07■□□□□ 0.96
LOC285556D6RIA3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LOC285556D6RIA3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LOC285556D6RIA3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LOC285556D6RIA3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.06■□□□□ 0.96
LOC285556D6RIA3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LOC285556D6RIA3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.06■□□□□ 0.96
LOC285556D6RIA3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms