Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CROCCP2-202ENST00000412962 2773 ntBASIC13.06□□□□□ -0.32
LINC01546A6NGU7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 LSM12P1-201ENST00000411836 588 ntBASIC13.05□□□□□ -0.32
LINC01546A6NGU7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 AGGF1P2-201ENST00000426656 2106 ntBASIC13.05□□□□□ -0.32
LINC01546A6NGU7 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01546A6NGU7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 AL355312.1-201ENST00000407115 2176 ntBASIC13.04□□□□□ -0.32
LINC01546A6NGU7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01546A6NGU7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.03□□□□□ -0.32
LINC01546A6NGU7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 AC093010.1-201ENST00000473625 1624 ntBASIC13.03□□□□□ -0.32
LINC01546A6NGU7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms