Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 RARRES2P10-201ENST00000564312 460 ntBASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.63■□□□□ 0.57
TCRBV9S1A1TA0A576 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 MIR564-202ENST00000385049 94 ntBASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 AC020916.1-201ENST00000587762 1774 ntBASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV9S1A1TA0A576 AL096828.2-201ENST00000567259 1965 ntBASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 GPAT2P1-201ENST00000444924 1672 ntBASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 FLJ13224-201ENST00000313737 1514 ntBASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 AP000593.1-201ENST00000393668 712 ntBASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 AL023284.2-201ENST00000405850 579 ntBASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 RPPH1-201ENST00000516869 333 ntBASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 AP000692.2-201ENST00000608391 879 ntBASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.61■□□□□ 0.57
TCRBV9S1A1TA0A576 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV9S1A1TA0A576 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms