Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 MIR5787-201ENST00000611784 55 ntBASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV27A0A0K0K1C4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 AL096828.2-201ENST00000567259 1965 ntBASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 AP000593.1-201ENST00000393668 712 ntBASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 POM121L13P-201ENST00000422362 380 ntBASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 UNC93B4-201ENST00000505679 747 ntBASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 RCC2P3-201ENST00000418112 1537 ntBASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 GMCL1P1-201ENST00000463439 1581 ntBASIC13.07□□□□□ -0.32
TRBV27A0A0K0K1C4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.06□□□□□ -0.32
TRBV27A0A0K0K1C4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV27A0A0K0K1C4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRBV27A0A0K0K1C4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV27A0A0K0K1C4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRBV27A0A0K0K1C4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV27A0A0K0K1C4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV27A0A0K0K1C4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRBV27A0A0K0K1C4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV27A0A0K0K1C4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV27A0A0K0K1C4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms