Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 AC141586.3-201ENST00000562166 1838 ntBASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 PMS2P1-201ENST00000431037 1228 ntBASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 AL591684.3-201ENST00000605187 298 ntBASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 TP73-AS1-207ENST00000624167 988 ntBASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC187A0A096LP49 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 KRT8P50-201ENST00000562022 1438 ntBASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 AP000593.1-201ENST00000393668 712 ntBASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 FAM197Y8-203ENST00000450145 560 ntBASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC187A0A096LP49 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 AC008687.5-201ENST00000593746 558 ntBASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 BNIP3P18-201ENST00000593976 575 ntBASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 IL9RP2-201ENST00000423948 1312 ntBASIC17.47■□□□□ 0.39
CCDC187A0A096LP49 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms