Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CDC42BPBQ9Y5S2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC27.91■■■□□ 2.06
CDC42BPBQ9Y5S2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC27.91■■■□□ 2.06
CDC42BPBQ9Y5S2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
CDC42BPBQ9Y5S2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC27.91■■■□□ 2.06
CDC42BPBQ9Y5S2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CDC42BPBQ9Y5S2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC27.91■■■□□ 2.06
CDC42BPBQ9Y5S2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CDC42BPBQ9Y5S2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CDC42BPBQ9Y5S2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CDC42BPBQ9Y5S2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CDC42BPBQ9Y5S2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CDC42BPBQ9Y5S2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CDC42BPBQ9Y5S2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CDC42BPBQ9Y5S2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
CDC42BPBQ9Y5S2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC27.9■■■□□ 2.06
CDC42BPBQ9Y5S2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CDC42BPBQ9Y5S2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CDC42BPBQ9Y5S2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
CDC42BPBQ9Y5S2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CDC42BPBQ9Y5S2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CDC42BPBQ9Y5S2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
CDC42BPBQ9Y5S2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
CDC42BPBQ9Y5S2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC27.89■■■□□ 2.06
CDC42BPBQ9Y5S2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
CDC42BPBQ9Y5S2 FAM215A-202ENST00000632077 792 ntBASIC27.89■■■□□ 2.06
CDC42BPBQ9Y5S2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
CDC42BPBQ9Y5S2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
CDC42BPBQ9Y5S2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC27.89■■■□□ 2.06
CDC42BPBQ9Y5S2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
CDC42BPBQ9Y5S2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CDC42BPBQ9Y5S2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC27.89■■■□□ 2.06
CDC42BPBQ9Y5S2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CDC42BPBQ9Y5S2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.05
CDC42BPBQ9Y5S2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC27.89■■■□□ 2.05
CDC42BPBQ9Y5S2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
CDC42BPBQ9Y5S2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC27.89■■■□□ 2.05
CDC42BPBQ9Y5S2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC27.89■■■□□ 2.05
CDC42BPBQ9Y5S2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC27.89■■■□□ 2.05
CDC42BPBQ9Y5S2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC27.89■■■□□ 2.05
CDC42BPBQ9Y5S2 AC140113.2-201ENST00000604370 208 ntBASIC27.89■■■□□ 2.05
CDC42BPBQ9Y5S2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC27.89■■■□□ 2.05
CDC42BPBQ9Y5S2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC27.89■■■□□ 2.05
CDC42BPBQ9Y5S2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC27.89■■■□□ 2.05
CDC42BPBQ9Y5S2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 AC021087.4-201ENST00000563761 564 ntBASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 MTDHP3-201ENST00000594186 672 ntBASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CDC42BPBQ9Y5S2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 NMU-202ENST00000505262 693 ntTSL 3 BASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 AC010327.4-202ENST00000591484 748 ntBASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 PMS2P7-201ENST00000506558 1336 ntBASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 AC132008.2-207ENST00000454517 770 ntBASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC27.87■■■□□ 2.05
CDC42BPBQ9Y5S2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 AC098831.1-202ENST00000438821 336 ntBASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 AC116407.3-201ENST00000623905 1129 ntBASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 AC009102.3-201ENST00000623118 1491 ntBASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 AP005117.1-201ENST00000584346 1413 ntBASIC27.86■■■□□ 2.05
CDC42BPBQ9Y5S2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CDC42BPBQ9Y5S2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CDC42BPBQ9Y5S2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC27.85■■■□□ 2.05
CDC42BPBQ9Y5S2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC27.85■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms