Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 AC116407.3-201ENST00000623905 1129 ntBASIC17.48■□□□□ 0.39
LHX6Q9UPM6 AL157888.1-201ENST00000631930 593 ntBASIC17.48■□□□□ 0.39
LHX6Q9UPM6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 LINC01006-201ENST00000333319 2292 ntBASIC17.47■□□□□ 0.39
LHX6Q9UPM6 AC104109.2-201ENST00000602919 1418 ntBASIC17.47■□□□□ 0.39
LHX6Q9UPM6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 NSUN5P1-202ENST00000421140 1535 ntBASIC17.47■□□□□ 0.39
LHX6Q9UPM6 NSUN5P2-203ENST00000457352 1529 ntBASIC17.47■□□□□ 0.39
LHX6Q9UPM6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 AC018712.1-201ENST00000455767 687 ntBASIC17.47■□□□□ 0.39
LHX6Q9UPM6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 AC108359.1-201ENST00000616451 1211 ntBASIC17.47■□□□□ 0.39
LHX6Q9UPM6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 FAM215A-202ENST00000632077 792 ntBASIC17.47■□□□□ 0.39
LHX6Q9UPM6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 GABARAPL3-202ENST00000624044 1851 ntBASIC17.47■□□□□ 0.39
LHX6Q9UPM6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LHX6Q9UPM6 KRT8P11-201ENST00000409686 1436 ntBASIC17.47■□□□□ 0.39
LHX6Q9UPM6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 AL591424.1-201ENST00000442569 1213 ntBASIC17.46■□□□□ 0.39
LHX6Q9UPM6 VENTXP7-201ENST00000475503 772 ntBASIC17.46■□□□□ 0.39
LHX6Q9UPM6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 AC011467.4-201ENST00000594891 528 ntBASIC17.46■□□□□ 0.39
LHX6Q9UPM6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LHX6Q9UPM6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LHX6Q9UPM6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 AC020907.5-201ENST00000624372 1936 ntBASIC17.45■□□□□ 0.38
LHX6Q9UPM6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.45■□□□□ 0.38
LHX6Q9UPM6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 AL355877.3-201ENST00000622820 899 ntBASIC17.45■□□□□ 0.38
LHX6Q9UPM6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 AP005212.1-201ENST00000581547 1997 ntBASIC17.45■□□□□ 0.38
LHX6Q9UPM6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX6Q9UPM6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms