Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCF1Q9UBD9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCF1Q9UBD9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCF1Q9UBD9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 BX276092.5-203ENST00000456199 560 ntBASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 AL121672.3-201ENST00000608644 468 ntBASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCF1Q9UBD9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 AC016734.2-201ENST00000624325 1377 ntBASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 TSSC2-201ENST00000450217 709 ntBASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 KRT8P26-201ENST00000534154 1276 ntBASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 RNF126P1-202ENST00000569893 925 ntBASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 AL163051.1-201ENST00000569214 1512 ntBASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCF1Q9UBD9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLCF1Q9UBD9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms