Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.33■□□□□ 0.52
NCDNQ9UBB6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCDNQ9UBB6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCDNQ9UBB6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.33■□□□□ 0.52
NCDNQ9UBB6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.33■□□□□ 0.52
NCDNQ9UBB6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NCDNQ9UBB6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCDNQ9UBB6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCDNQ9UBB6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCDNQ9UBB6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCDNQ9UBB6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.33■□□□□ 0.52
NCDNQ9UBB6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
NCDNQ9UBB6 AC104417.2-201ENST00000562989 1793 ntBASIC18.32■□□□□ 0.52
NCDNQ9UBB6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 AL353692.3-201ENST00000407031 1396 ntBASIC18.32■□□□□ 0.52
NCDNQ9UBB6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 YBX2P1-201ENST00000394192 760 ntBASIC18.32■□□□□ 0.52
NCDNQ9UBB6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 AC114341.1-201ENST00000618070 349 ntBASIC18.32■□□□□ 0.52
NCDNQ9UBB6 AC134684.3-201ENST00000641758 218 ntBASIC18.32■□□□□ 0.52
NCDNQ9UBB6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NCDNQ9UBB6 KRT8P3-201ENST00000519669 1449 ntBASIC18.32■□□□□ 0.52
NCDNQ9UBB6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 AC244107.1-201ENST00000442033 332 ntBASIC18.31■□□□□ 0.52
NCDNQ9UBB6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 AL162377.1-201ENST00000618844 1793 ntBASIC18.31■□□□□ 0.52
NCDNQ9UBB6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.31■□□□□ 0.52
NCDNQ9UBB6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 HTR5BP-201ENST00000430851 1154 ntBASIC18.3■□□□□ 0.52
NCDNQ9UBB6 HNRNPDP1-201ENST00000439535 754 ntBASIC18.3■□□□□ 0.52
NCDNQ9UBB6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 KRT18P3-201ENST00000451602 1288 ntBASIC18.3■□□□□ 0.52
NCDNQ9UBB6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 AC040169.1-201ENST00000565382 521 ntBASIC18.3■□□□□ 0.52
NCDNQ9UBB6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 HOXB1-202ENST00000577092 1414 ntBASIC18.3■□□□□ 0.52
NCDNQ9UBB6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 AL512408.1-201ENST00000569378 2000 ntBASIC18.3■□□□□ 0.52
NCDNQ9UBB6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCDNQ9UBB6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 449.3 ms