Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 DRAXINP1-201ENST00000437611 948 ntBASIC19.13■□□□□ 0.65
HPS4Q9NQG7 NUS1P1-201ENST00000446295 882 ntBASIC19.13■□□□□ 0.65
HPS4Q9NQG7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
HPS4Q9NQG7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 Z83836.1-201ENST00000624605 1642 ntBASIC19.12■□□□□ 0.65
HPS4Q9NQG7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.12■□□□□ 0.65
HPS4Q9NQG7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 PVRIG2P-201ENST00000435460 978 ntBASIC19.11■□□□□ 0.65
HPS4Q9NQG7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 LINC00265-3P-201ENST00000447588 903 ntBASIC19.11■□□□□ 0.65
HPS4Q9NQG7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 AC006333.2-201ENST00000607957 2099 ntBASIC19.11■□□□□ 0.65
HPS4Q9NQG7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.11■□□□□ 0.65
HPS4Q9NQG7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms