Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC246785.2-201ENST00000432512 513 ntBASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 KRT18P23-201ENST00000435622 1283 ntBASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF3Q9HD45 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 KRT18P1-202ENST00000452408 1331 ntBASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 AC008556.1-201ENST00000610908 2040 ntBASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 AL845331.1-201ENST00000424978 1190 ntBASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 TEX21P-204ENST00000641479 1693 ntBASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.49■□□□□ 0.55
TM9SF3Q9HD45 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 LETM1P2-201ENST00000597330 2178 ntBASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 UNC93B7-201ENST00000509439 705 ntBASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 RNF126P1-202ENST00000569893 925 ntBASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 AC093503.3-201ENST00000624917 2352 ntBASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 KRT8P7-201ENST00000533003 1432 ntBASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF3Q9HD45 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 AC004870.1-201ENST00000315132 882 ntBASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms