Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.1■□□□□ 0.97
ZFYVE28Q9HCC9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.1■□□□□ 0.97
ZFYVE28Q9HCC9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.1■□□□□ 0.97
ZFYVE28Q9HCC9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ZFYVE28Q9HCC9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.1■□□□□ 0.97
ZFYVE28Q9HCC9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFYVE28Q9HCC9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 YBX2P1-201ENST00000394192 760 ntBASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 RPS2P1-201ENST00000434010 821 ntBASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 AC112482.1-201ENST00000492080 688 ntBASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 AC068587.9-201ENST00000641814 219 ntBASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 Z98044.1-201ENST00000632503 1764 ntBASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 KRT8P50-201ENST00000562022 1438 ntBASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ZFYVE28Q9HCC9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 AC040169.1-201ENST00000565382 521 ntBASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 AC008687.5-201ENST00000593746 558 ntBASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 Z83851.2-201ENST00000609564 659 ntBASIC21.08■□□□□ 0.97
ZFYVE28Q9HCC9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZFYVE28Q9HCC9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZFYVE28Q9HCC9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.08■□□□□ 0.96
ZFYVE28Q9HCC9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ZFYVE28Q9HCC9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.08■□□□□ 0.96
ZFYVE28Q9HCC9 INTS4P1-201ENST00000438455 1935 ntBASIC21.08■□□□□ 0.96
ZFYVE28Q9HCC9 LINC01521-201ENST00000504184 1943 ntBASIC21.08■□□□□ 0.96
ZFYVE28Q9HCC9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.08■□□□□ 0.96
ZFYVE28Q9HCC9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 AP005117.1-201ENST00000584346 1413 ntBASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 AL357033.4-201ENST00000617703 1807 ntBASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 AC004967.1-201ENST00000453589 447 ntBASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 AC113404.2-201ENST00000507884 177 ntBASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 OR7E14P-202ENST00000530490 1290 ntBASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 SART3-203ENST00000546611 1184 ntBASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZFYVE28Q9HCC9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.06■□□□□ 0.96
ZFYVE28Q9HCC9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFYVE28Q9HCC9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFYVE28Q9HCC9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFYVE28Q9HCC9 RNA5SP415-201ENST00000517246 115 ntBASIC21.06■□□□□ 0.96
ZFYVE28Q9HCC9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.06■□□□□ 0.96
ZFYVE28Q9HCC9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFYVE28Q9HCC9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.06■□□□□ 0.96
ZFYVE28Q9HCC9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.06■□□□□ 0.96
ZFYVE28Q9HCC9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZFYVE28Q9HCC9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms