Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 AC007613.1-201ENST00000572811 2597 ntBASIC17.7■□□□□ 0.42
BRF2Q9HAW0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.7■□□□□ 0.42
BRF2Q9HAW0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 AL163051.1-201ENST00000569214 1512 ntBASIC17.7■□□□□ 0.42
BRF2Q9HAW0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRF2Q9HAW0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 AC020763.4-201ENST00000623414 4170 ntBASIC17.69■□□□□ 0.42
BRF2Q9HAW0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 KRT18P23-201ENST00000435622 1283 ntBASIC17.69■□□□□ 0.42
BRF2Q9HAW0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 EGLN1P1-201ENST00000531623 762 ntBASIC17.69■□□□□ 0.42
BRF2Q9HAW0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.69■□□□□ 0.42
BRF2Q9HAW0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 MIR149-201ENST00000384879 89 ntBASIC17.68■□□□□ 0.42
BRF2Q9HAW0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 GMCL1P1-201ENST00000463439 1581 ntBASIC17.68■□□□□ 0.42
BRF2Q9HAW0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.68■□□□□ 0.42
BRF2Q9HAW0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRF2Q9HAW0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRF2Q9HAW0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRF2Q9HAW0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRF2Q9HAW0 ESPNP-201ENST00000270691 2015 ntBASIC17.67■□□□□ 0.42
BRF2Q9HAW0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms