Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.37■□□□□ 0.85
UBE2OQ9C0C9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.37■□□□□ 0.85
UBE2OQ9C0C9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2OQ9C0C9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2OQ9C0C9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
UBE2OQ9C0C9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2OQ9C0C9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2OQ9C0C9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2OQ9C0C9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.37■□□□□ 0.85
UBE2OQ9C0C9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.37■□□□□ 0.85
UBE2OQ9C0C9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.37■□□□□ 0.85
UBE2OQ9C0C9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2OQ9C0C9 AC104109.2-201ENST00000602919 1418 ntBASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 AC112482.1-201ENST00000492080 688 ntBASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 AC011840.4-201ENST00000578471 627 ntBASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 AC010240.3-201ENST00000607688 395 ntBASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 FAM197Y3-203ENST00000618346 717 ntBASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2OQ9C0C9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 IGHGP-201ENST00000390555 1178 ntBASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 AL355877.3-201ENST00000622820 899 ntBASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
UBE2OQ9C0C9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 AC244107.1-201ENST00000442033 332 ntBASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 DNAJB3-201ENST00000446806 729 ntBASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 AC145285.3-201ENST00000564603 959 ntBASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 AC134684.3-201ENST00000641758 218 ntBASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2OQ9C0C9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.33■□□□□ 0.85
UBE2OQ9C0C9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms