Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
VRK1Q99986 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VRK1Q99986 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
VRK1Q99986 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VRK1Q99986 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.34■□□□□ 0.21
VRK1Q99986 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.34■□□□□ 0.21
VRK1Q99986 ARMC10P1-201ENST00000313754 855 ntBASIC16.34■□□□□ 0.21
VRK1Q99986 INGX-201ENST00000359239 846 ntBASIC16.34■□□□□ 0.21
VRK1Q99986 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VRK1Q99986 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VRK1Q99986 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VRK1Q99986 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
VRK1Q99986 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
VRK1Q99986 AL590326.2-201ENST00000625139 305 ntBASIC16.34■□□□□ 0.21
VRK1Q99986 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
VRK1Q99986 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VRK1Q99986 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VRK1Q99986 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VRK1Q99986 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.34■□□□□ 0.21
VRK1Q99986 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.34■□□□□ 0.21
VRK1Q99986 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VRK1Q99986 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VRK1Q99986 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.34■□□□□ 0.21
VRK1Q99986 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.34■□□□□ 0.21
VRK1Q99986 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
VRK1Q99986 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
VRK1Q99986 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
VRK1Q99986 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
VRK1Q99986 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
VRK1Q99986 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
VRK1Q99986 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VRK1Q99986 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
VRK1Q99986 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
VRK1Q99986 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VRK1Q99986 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.33■□□□□ 0.21
VRK1Q99986 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
VRK1Q99986 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
VRK1Q99986 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VRK1Q99986 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.33■□□□□ 0.2
VRK1Q99986 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.33■□□□□ 0.2
VRK1Q99986 SLC25A1P2-201ENST00000430693 912 ntBASIC16.33■□□□□ 0.2
VRK1Q99986 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.33■□□□□ 0.2
VRK1Q99986 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.33■□□□□ 0.2
VRK1Q99986 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.33■□□□□ 0.2
VRK1Q99986 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.33■□□□□ 0.2
VRK1Q99986 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VRK1Q99986 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.33■□□□□ 0.2
VRK1Q99986 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VRK1Q99986 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
VRK1Q99986 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.33■□□□□ 0.2
VRK1Q99986 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
VRK1Q99986 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.33■□□□□ 0.2
VRK1Q99986 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.33■□□□□ 0.2
VRK1Q99986 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
VRK1Q99986 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK1Q99986 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.32■□□□□ 0.2
VRK1Q99986 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VRK1Q99986 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.32■□□□□ 0.2
VRK1Q99986 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VRK1Q99986 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VRK1Q99986 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
VRK1Q99986 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
VRK1Q99986 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.32■□□□□ 0.2
VRK1Q99986 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.32■□□□□ 0.2
VRK1Q99986 HMGA1P5-201ENST00000412453 271 ntBASIC16.32■□□□□ 0.2
VRK1Q99986 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.32■□□□□ 0.2
VRK1Q99986 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.32■□□□□ 0.2
VRK1Q99986 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.32■□□□□ 0.2
VRK1Q99986 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VRK1Q99986 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.32■□□□□ 0.2
VRK1Q99986 AL445228.2-201ENST00000605589 952 ntBASIC16.32■□□□□ 0.2
VRK1Q99986 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms