Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.69■□□□□ 0.58
PHOX2BQ99453 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PHOX2BQ99453 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.69■□□□□ 0.58
PHOX2BQ99453 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.69■□□□□ 0.58
PHOX2BQ99453 GPAT2P1-201ENST00000444924 1672 ntBASIC18.69■□□□□ 0.58
PHOX2BQ99453 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.69■□□□□ 0.58
PHOX2BQ99453 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.69■□□□□ 0.58
PHOX2BQ99453 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.68■□□□□ 0.58
PHOX2BQ99453 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.68■□□□□ 0.58
PHOX2BQ99453 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.68■□□□□ 0.58
PHOX2BQ99453 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PHOX2BQ99453 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.68■□□□□ 0.58
PHOX2BQ99453 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.68■□□□□ 0.58
PHOX2BQ99453 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.68■□□□□ 0.58
PHOX2BQ99453 MIR3917-201ENST00000580971 93 ntBASIC18.68■□□□□ 0.58
PHOX2BQ99453 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.68■□□□□ 0.58
PHOX2BQ99453 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PHOX2BQ99453 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.68■□□□□ 0.58
PHOX2BQ99453 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 AC020907.5-201ENST00000624372 1936 ntBASIC18.68■□□□□ 0.58
PHOX2BQ99453 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHOX2BQ99453 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.68■□□□□ 0.58
PHOX2BQ99453 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHOX2BQ99453 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHOX2BQ99453 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHOX2BQ99453 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHOX2BQ99453 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHOX2BQ99453 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHOX2BQ99453 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 MINOS1P3-201ENST00000457048 203 ntBASIC18.67■□□□□ 0.58
PHOX2BQ99453 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 AP003733.1-201ENST00000491725 852 ntBASIC18.67■□□□□ 0.58
PHOX2BQ99453 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 AC011467.4-201ENST00000594891 528 ntBASIC18.67■□□□□ 0.58
PHOX2BQ99453 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 MIR1199-201ENST00000621445 119 ntBASIC18.67■□□□□ 0.58
PHOX2BQ99453 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHOX2BQ99453 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHOX2BQ99453 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHOX2BQ99453 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHOX2BQ99453 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHOX2BQ99453 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PHOX2BQ99453 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHOX2BQ99453 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHOX2BQ99453 AFG3L1P-217ENST00000557444 2447 ntBASIC18.66■□□□□ 0.58
PHOX2BQ99453 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.66■□□□□ 0.58
PHOX2BQ99453 AP006288.1-201ENST00000446065 395 ntBASIC18.66■□□□□ 0.58
PHOX2BQ99453 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms