Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 AKR1C7P-201ENST00000305623 895 ntBASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 LINC01126-201ENST00000623515 1646 ntBASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 AL031598.1-201ENST00000561511 1773 ntBASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 GUSBP12-201ENST00000513727 720 ntBASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.73■■□□□ 1.07
CDK5RAP2Q96SN8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 VENTXP7-201ENST00000475503 772 ntBASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 AL691432.3-201ENST00000621860 400 ntBASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.72■■□□□ 1.07
CDK5RAP2Q96SN8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 TP73-AS1-207ENST00000624167 988 ntBASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 AC005332.3-201ENST00000589904 676 ntBASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.71■■□□□ 1.07
CDK5RAP2Q96SN8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
CDK5RAP2Q96SN8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDK5RAP2Q96SN8 NUS1P2-201ENST00000417358 873 ntBASIC21.7■■□□□ 1.06
CDK5RAP2Q96SN8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
CDK5RAP2Q96SN8 KRT18P31-201ENST00000506277 1292 ntBASIC21.7■■□□□ 1.06
CDK5RAP2Q96SN8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.7■■□□□ 1.06
CDK5RAP2Q96SN8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CDK5RAP2Q96SN8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDK5RAP2Q96SN8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.7■■□□□ 1.06
CDK5RAP2Q96SN8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDK5RAP2Q96SN8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDK5RAP2Q96SN8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 AC004870.1-201ENST00000315132 882 ntBASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 RN7SL606P-201ENST00000472779 293 ntBASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 AL138831.2-201ENST00000606564 490 ntBASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CDK5RAP2Q96SN8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms