Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 GMCL1P1-201ENST00000463439 1581 ntBASIC13.67□□□□□ -0.22
ODF3Q96PU9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 MIR149-201ENST00000384879 89 ntBASIC13.67□□□□□ -0.22
ODF3Q96PU9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF3Q96PU9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.66□□□□□ -0.22
ODF3Q96PU9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 UNC93B2-201ENST00000285383 730 ntBASIC13.66□□□□□ -0.22
ODF3Q96PU9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 CCR12P-201ENST00000446203 998 ntBASIC13.66□□□□□ -0.22
ODF3Q96PU9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 WWOX-216ENST00000569818 525 ntBASIC13.66□□□□□ -0.22
ODF3Q96PU9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 MIR3180-4-201ENST00000582223 153 ntBASIC13.66□□□□□ -0.22
ODF3Q96PU9 MIR4785-201ENST00000585005 73 ntBASIC13.66□□□□□ -0.22
ODF3Q96PU9 AL023803.3-201ENST00000615559 522 ntBASIC13.66□□□□□ -0.22
ODF3Q96PU9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.66□□□□□ -0.22
ODF3Q96PU9 AC036111.1-201ENST00000533973 1582 ntBASIC13.66□□□□□ -0.22
ODF3Q96PU9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF3Q96PU9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF3Q96PU9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ODF3Q96PU9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF3Q96PU9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ODF3Q96PU9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF3Q96PU9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ODF3Q96PU9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.65□□□□□ -0.22
ODF3Q96PU9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF3Q96PU9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ODF3Q96PU9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ODF3Q96PU9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ODF3Q96PU9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ODF3Q96PU9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ODF3Q96PU9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF3Q96PU9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF3Q96PU9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF3Q96PU9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.65□□□□□ -0.22
ODF3Q96PU9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms