Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
DUX3Q96PT4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
DUX3Q96PT4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.4□□□□□ -0.1
DUX3Q96PT4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
DUX3Q96PT4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.4□□□□□ -0.1
DUX3Q96PT4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.4□□□□□ -0.1
DUX3Q96PT4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 RASA4DP-201ENST00000460726 1199 ntBASIC14.4□□□□□ -0.1
DUX3Q96PT4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.4□□□□□ -0.1
DUX3Q96PT4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.4□□□□□ -0.1
DUX3Q96PT4 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.4□□□□□ -0.1
DUX3Q96PT4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.4□□□□□ -0.1
DUX3Q96PT4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.4□□□□□ -0.1
DUX3Q96PT4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
DUX3Q96PT4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
DUX3Q96PT4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
DUX3Q96PT4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DUX3Q96PT4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 ZNF444P1-201ENST00000559497 298 ntBASIC14.39□□□□□ -0.11
DUX3Q96PT4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 HYMAI.1-201ENST00000620949 238 ntBASIC14.39□□□□□ -0.11
DUX3Q96PT4 AC112497.1-201ENST00000624824 639 ntBASIC14.39□□□□□ -0.11
DUX3Q96PT4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 AC099343.3-201ENST00000605834 2503 ntBASIC14.39□□□□□ -0.11
DUX3Q96PT4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX3Q96PT4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
DUX3Q96PT4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms