Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGB4Q8WW32 AL353692.3-201ENST00000407031 1396 ntBASIC18.55■□□□□ 0.56
HMGB4Q8WW32 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 NUS1P2-201ENST00000417358 873 ntBASIC18.54■□□□□ 0.56
HMGB4Q8WW32 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 IGHV3-47-201ENST00000425060 335 ntBASIC18.54■□□□□ 0.56
HMGB4Q8WW32 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 NSUN5P1-202ENST00000421140 1535 ntBASIC18.54■□□□□ 0.56
HMGB4Q8WW32 NSUN5P2-203ENST00000457352 1529 ntBASIC18.54■□□□□ 0.56
HMGB4Q8WW32 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGB4Q8WW32 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 SLC25A6P4-201ENST00000586535 553 ntBASIC18.53■□□□□ 0.56
HMGB4Q8WW32 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB4Q8WW32 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 MINOS1P3-201ENST00000457048 203 ntBASIC18.52■□□□□ 0.56
HMGB4Q8WW32 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 RN7SL606P-201ENST00000472779 293 ntBASIC18.52■□□□□ 0.56
HMGB4Q8WW32 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 AL662844.1-201ENST00000546340 181 ntBASIC18.52■□□□□ 0.56
HMGB4Q8WW32 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB4Q8WW32 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGB4Q8WW32 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGB4Q8WW32 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGB4Q8WW32 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HMGB4Q8WW32 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
HMGB4Q8WW32 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
HMGB4Q8WW32 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
HMGB4Q8WW32 AL357033.4-201ENST00000617703 1807 ntBASIC18.51■□□□□ 0.55
HMGB4Q8WW32 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB4Q8WW32 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB4Q8WW32 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB4Q8WW32 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB4Q8WW32 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB4Q8WW32 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB4Q8WW32 MRPL3P1-201ENST00000400109 1033 ntBASIC18.51■□□□□ 0.55
HMGB4Q8WW32 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB4Q8WW32 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
HMGB4Q8WW32 AC091607.1-201ENST00000490318 1060 ntBASIC18.51■□□□□ 0.55
HMGB4Q8WW32 AC011840.4-201ENST00000578471 627 ntBASIC18.51■□□□□ 0.55
HMGB4Q8WW32 AP005901.3-202ENST00000581653 237 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms