Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD3Q8N328 AC098818.2-201ENST00000564925 2320 ntBASIC18.78■□□□□ 0.6
PGBD3Q8N328 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD3Q8N328 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD3Q8N328 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD3Q8N328 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD3Q8N328 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.77■□□□□ 0.6
PGBD3Q8N328 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD3Q8N328 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD3Q8N328 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD3Q8N328 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PGBD3Q8N328 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD3Q8N328 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD3Q8N328 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD3Q8N328 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD3Q8N328 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD3Q8N328 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD3Q8N328 NUS1P1-201ENST00000446295 882 ntBASIC18.77■□□□□ 0.6
PGBD3Q8N328 UNC93B7-201ENST00000509439 705 ntBASIC18.77■□□□□ 0.6
PGBD3Q8N328 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.77■□□□□ 0.6
PGBD3Q8N328 RNF126P1-202ENST00000569893 925 ntBASIC18.77■□□□□ 0.6
PGBD3Q8N328 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.77■□□□□ 0.6
PGBD3Q8N328 AC010240.3-201ENST00000607688 395 ntBASIC18.77■□□□□ 0.6
PGBD3Q8N328 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD3Q8N328 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD3Q8N328 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD3Q8N328 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD3Q8N328 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD3Q8N328 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PGBD3Q8N328 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.77■□□□□ 0.59
PGBD3Q8N328 AL020996.1-203ENST00000536896 2307 ntBASIC18.77■□□□□ 0.59
PGBD3Q8N328 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PGBD3Q8N328 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PGBD3Q8N328 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
PGBD3Q8N328 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.76■□□□□ 0.59
PGBD3Q8N328 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PGBD3Q8N328 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PGBD3Q8N328 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.76■□□□□ 0.59
PGBD3Q8N328 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PGBD3Q8N328 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 IFNL4P1-201ENST00000607083 540 ntBASIC18.76■□□□□ 0.59
PGBD3Q8N328 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.76■□□□□ 0.59
PGBD3Q8N328 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.76■□□□□ 0.59
PGBD3Q8N328 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PGBD3Q8N328 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD3Q8N328 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD3Q8N328 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PGBD3Q8N328 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD3Q8N328 KRT8P7-201ENST00000533003 1432 ntBASIC18.75■□□□□ 0.59
PGBD3Q8N328 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.75■□□□□ 0.59
PGBD3Q8N328 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
PGBD3Q8N328 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD3Q8N328 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD3Q8N328 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.75■□□□□ 0.59
PGBD3Q8N328 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.75■□□□□ 0.59
PGBD3Q8N328 FAAHP1-202ENST00000446499 1238 ntBASIC18.75■□□□□ 0.59
PGBD3Q8N328 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.75■□□□□ 0.59
PGBD3Q8N328 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.75■□□□□ 0.59
PGBD3Q8N328 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD3Q8N328 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD3Q8N328 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
PGBD3Q8N328 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD3Q8N328 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.75■□□□□ 0.59
PGBD3Q8N328 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PGBD3Q8N328 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.75■□□□□ 0.59
PGBD3Q8N328 AC093484.2-201ENST00000580996 2166 ntBASIC18.75■□□□□ 0.59
PGBD3Q8N328 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PGBD3Q8N328 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
PGBD3Q8N328 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.74■□□□□ 0.59
PGBD3Q8N328 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD3Q8N328 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD3Q8N328 Z83836.1-201ENST00000624605 1642 ntBASIC18.74■□□□□ 0.59
PGBD3Q8N328 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD3Q8N328 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD3Q8N328 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD3Q8N328 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD3Q8N328 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD3Q8N328 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
PGBD3Q8N328 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.74■□□□□ 0.59
PGBD3Q8N328 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD3Q8N328 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PGBD3Q8N328 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD3Q8N328 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD3Q8N328 TOB2P1-201ENST00000469761 992 ntBASIC18.74■□□□□ 0.59
PGBD3Q8N328 AP003733.1-201ENST00000491725 852 ntBASIC18.74■□□□□ 0.59
PGBD3Q8N328 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
PGBD3Q8N328 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms