Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.92■□□□□ 0.62
SIX5Q8N196 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX5Q8N196 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX5Q8N196 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.92■□□□□ 0.62
SIX5Q8N196 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.92■□□□□ 0.62
SIX5Q8N196 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.92■□□□□ 0.62
SIX5Q8N196 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.92■□□□□ 0.62
SIX5Q8N196 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SIX5Q8N196 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX5Q8N196 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.92■□□□□ 0.62
SIX5Q8N196 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIX5Q8N196 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIX5Q8N196 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIX5Q8N196 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIX5Q8N196 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIX5Q8N196 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIX5Q8N196 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIX5Q8N196 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.91■□□□□ 0.62
SIX5Q8N196 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIX5Q8N196 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SIX5Q8N196 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.91■□□□□ 0.62
SIX5Q8N196 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.91■□□□□ 0.62
SIX5Q8N196 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.91■□□□□ 0.62
SIX5Q8N196 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SIX5Q8N196 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.91■□□□□ 0.62
SIX5Q8N196 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.91■□□□□ 0.62
SIX5Q8N196 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.91■□□□□ 0.62
SIX5Q8N196 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.91■□□□□ 0.62
SIX5Q8N196 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.91■□□□□ 0.62
SIX5Q8N196 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
SIX5Q8N196 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.91■□□□□ 0.62
SIX5Q8N196 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.91■□□□□ 0.62
SIX5Q8N196 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SIX5Q8N196 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIX5Q8N196 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.91■□□□□ 0.62
SIX5Q8N196 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX5Q8N196 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.9■□□□□ 0.62
SIX5Q8N196 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX5Q8N196 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SIX5Q8N196 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.9■□□□□ 0.62
SIX5Q8N196 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX5Q8N196 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX5Q8N196 MIR564-202ENST00000385049 94 ntBASIC18.9■□□□□ 0.62
SIX5Q8N196 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.9■□□□□ 0.62
SIX5Q8N196 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX5Q8N196 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
SIX5Q8N196 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.9■□□□□ 0.62
SIX5Q8N196 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.9■□□□□ 0.62
SIX5Q8N196 BNIP3P18-201ENST00000593976 575 ntBASIC18.9■□□□□ 0.62
SIX5Q8N196 MIR7706-201ENST00000613747 67 ntBASIC18.9■□□□□ 0.62
SIX5Q8N196 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SIX5Q8N196 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX5Q8N196 AC026471.1-201ENST00000564629 3026 ntBASIC18.9■□□□□ 0.62
SIX5Q8N196 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX5Q8N196 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX5Q8N196 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.9■□□□□ 0.62
SIX5Q8N196 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SIX5Q8N196 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SIX5Q8N196 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX5Q8N196 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SIX5Q8N196 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
SIX5Q8N196 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.9■□□□□ 0.62
SIX5Q8N196 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.89■□□□□ 0.62
SIX5Q8N196 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SIX5Q8N196 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SIX5Q8N196 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SIX5Q8N196 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.89■□□□□ 0.61
SIX5Q8N196 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SIX5Q8N196 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SIX5Q8N196 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.89■□□□□ 0.61
SIX5Q8N196 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.89■□□□□ 0.61
SIX5Q8N196 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 AC096582.2-201ENST00000510860 516 ntBASIC18.89■□□□□ 0.61
SIX5Q8N196 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.89■□□□□ 0.61
SIX5Q8N196 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.89■□□□□ 0.61
SIX5Q8N196 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 MIR3180-4-201ENST00000582223 153 ntBASIC18.89■□□□□ 0.61
SIX5Q8N196 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.89■□□□□ 0.61
SIX5Q8N196 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.89■□□□□ 0.61
SIX5Q8N196 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.89■□□□□ 0.61
SIX5Q8N196 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.89■□□□□ 0.61
SIX5Q8N196 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.89■□□□□ 0.61
SIX5Q8N196 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SIX5Q8N196 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.89■□□□□ 0.61
SIX5Q8N196 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX5Q8N196 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms