Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS2Q86VP3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS2Q86VP3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS2Q86VP3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 CD99P1-205ENST00000527459 561 ntBASIC18.63■□□□□ 0.57
PACS2Q86VP3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 AL356652.1-201ENST00000615962 565 ntBASIC18.63■□□□□ 0.57
PACS2Q86VP3 MYC-209ENST00000641252 345 ntBASIC18.63■□□□□ 0.57
PACS2Q86VP3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS2Q86VP3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS2Q86VP3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS2Q86VP3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS2Q86VP3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS2Q86VP3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS2Q86VP3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS2Q86VP3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS2Q86VP3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.63■□□□□ 0.57
PACS2Q86VP3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS2Q86VP3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS2Q86VP3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PACS2Q86VP3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
PACS2Q86VP3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 LINC02199-201ENST00000506655 2702 ntBASIC18.61■□□□□ 0.57
PACS2Q86VP3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 AL136379.1-201ENST00000623471 2642 ntBASIC18.61■□□□□ 0.57
PACS2Q86VP3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PACS2Q86VP3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.61■□□□□ 0.57
PACS2Q86VP3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.61■□□□□ 0.57
PACS2Q86VP3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
PACS2Q86VP3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PACS2Q86VP3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PACS2Q86VP3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.61■□□□□ 0.57
PACS2Q86VP3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.61■□□□□ 0.57
PACS2Q86VP3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PACS2Q86VP3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS2Q86VP3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PACS2Q86VP3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms