Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 RPS2P1-201ENST00000434010 821 ntBASIC12.84□□□□□ -0.35
CSMD3Q7Z407 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 KRT89P-201ENST00000620027 1478 ntBASIC12.84□□□□□ -0.35
CSMD3Q7Z407 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 HLA-J-203ENST00000494367 1087 ntBASIC12.84□□□□□ -0.35
CSMD3Q7Z407 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 MIR3687-2-201ENST00000577708 61 ntBASIC12.84□□□□□ -0.35
CSMD3Q7Z407 AC011840.4-201ENST00000578471 627 ntBASIC12.84□□□□□ -0.35
CSMD3Q7Z407 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 MIR3687-1-201ENST00000614492 61 ntBASIC12.84□□□□□ -0.35
CSMD3Q7Z407 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD3Q7Z407 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.83□□□□□ -0.35
CSMD3Q7Z407 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
CSMD3Q7Z407 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 INTS4P1-201ENST00000438455 1935 ntBASIC12.83□□□□□ -0.36
CSMD3Q7Z407 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 NUS1P2-201ENST00000417358 873 ntBASIC12.83□□□□□ -0.36
CSMD3Q7Z407 METTL21AP1-201ENST00000438852 635 ntBASIC12.83□□□□□ -0.36
CSMD3Q7Z407 KRT18P3-201ENST00000451602 1288 ntBASIC12.83□□□□□ -0.36
CSMD3Q7Z407 AP003733.1-201ENST00000491725 852 ntBASIC12.83□□□□□ -0.36
CSMD3Q7Z407 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 AC004832.2-201ENST00000426397 482 ntBASIC12.83□□□□□ -0.36
CSMD3Q7Z407 CNN2P11-201ENST00000429351 262 ntBASIC12.83□□□□□ -0.36
CSMD3Q7Z407 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 AL356488.2-201ENST00000602755 427 ntBASIC12.83□□□□□ -0.36
CSMD3Q7Z407 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD3Q7Z407 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 AL353692.3-201ENST00000407031 1396 ntBASIC12.82□□□□□ -0.36
CSMD3Q7Z407 ZNF259P1-201ENST00000407656 1365 ntBASIC12.82□□□□□ -0.36
CSMD3Q7Z407 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 HTR5BP-201ENST00000430851 1154 ntBASIC12.82□□□□□ -0.36
CSMD3Q7Z407 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.82□□□□□ -0.36
CSMD3Q7Z407 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms