Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.39■■□□□ 1.33
RGPD4Q7Z3J3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 AC006557.2-201ENST00000592985 1240 ntBASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 AC026310.3-201ENST00000625186 2373 ntBASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RGPD4Q7Z3J3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 EP400NL-214ENST00000641289 2402 ntBASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 AC009154.2-201ENST00000621177 724 ntBASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RGPD4Q7Z3J3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
RGPD4Q7Z3J3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 AC068472.1-201ENST00000474589 881 ntBASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 AC136632.2-201ENST00000512891 861 ntBASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 MIR149-201ENST00000384879 89 ntBASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 KRT18P2-201ENST00000447938 1258 ntBASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RGPD4Q7Z3J3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 MTMR9LP-203ENST00000426597 1545 ntBASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 AL078644.1-201ENST00000609881 752 ntBASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RGPD4Q7Z3J3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms