Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 PTGS1-202ENST00000362012 4964 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.543e-6■□□□□ 11
SND1Q7KZF4 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC11.41□□□□□ -0.583e-6■□□□□ 11
SND1Q7KZF4 PTGS1-207ENST00000619306 5051 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.643e-6■□□□□ 11
SND1Q7KZF4 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC10.77□□□□□ -0.683e-6■□□□□ 11
SND1Q7KZF4 VDAC3-203ENST00000518563 719 ntTSL 226.84■■□□□ 1.891e-6■□□□□ 11
SND1Q7KZF4 VDAC3-202ENST00000518495 531 ntTSL 36.91□□□□□ -1.31e-6■□□□□ 11
SND1Q7KZF4 C17orf62-223ENST00000582438 809 ntTSL 321.57■■□□□ 1.044e-7■□□□□ 11
SND1Q7KZF4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.984e-7■□□□□ 11
SND1Q7KZF4 C17orf62-227ENST00000582725 1127 ntTSL 520.87■□□□□ 0.934e-7■□□□□ 11
SND1Q7KZF4 C17orf62-205ENST00000536759 2222 ntTSL 220.42■□□□□ 0.864e-7■□□□□ 11
SND1Q7KZF4 C17orf62-208ENST00000577696 656 ntTSL 420.25■□□□□ 0.834e-7■□□□□ 11
SND1Q7KZF4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.834e-7■□□□□ 11
SND1Q7KZF4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.96■□□□□ 0.794e-7■□□□□ 11
SND1Q7KZF4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.761e-8■□□□□ 11
SND1Q7KZF4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.45■□□□□ 0.74e-7■□□□□ 11
SND1Q7KZF4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.18■□□□□ 0.664e-7■□□□□ 11
SND1Q7KZF4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.84■□□□□ 0.614e-7■□□□□ 11
SND1Q7KZF4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.534e-7■□□□□ 11
SND1Q7KZF4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.491e-8■□□□□ 11
SND1Q7KZF4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.471e-8■□□□□ 11
SND1Q7KZF4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.41e-8■□□□□ 11
SND1Q7KZF4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.371e-8■□□□□ 11
SND1Q7KZF4 C17orf62-232ENST00000584024 1965 ntTSL 217.3■□□□□ 0.364e-7■□□□□ 11
SND1Q7KZF4 C17orf62-209ENST00000577707 534 ntTSL 416.56■□□□□ 0.244e-7■□□□□ 11
SND1Q7KZF4 TEX264-213ENST00000489026 800 ntTSL 216.5■□□□□ 0.231e-8■□□□□ 11
SND1Q7KZF4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.134e-7■□□□□ 11
SND1Q7KZF4 C17orf62-212ENST00000577888 617 ntTSL 215.85■□□□□ 0.134e-7■□□□□ 11
SND1Q7KZF4 SREBF2-205ENST00000463741 634 ntTSL 215.62■□□□□ 0.095e-9■□□□□ 11
SND1Q7KZF4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.051e-8■□□□□ 11
SND1Q7KZF4 TEX264-211ENST00000463857 3937 ntTSL 1 (best)14.73□□□□□ -0.051e-8■□□□□ 11
SND1Q7KZF4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.061e-8■□□□□ 11
SND1Q7KZF4 C17orf62-214ENST00000578895 3154 ntTSL 214.08□□□□□ -0.164e-7■□□□□ 11
SND1Q7KZF4 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.194e-7■□□□□ 11
SND1Q7KZF4 C17orf62-219ENST00000579751 269 ntTSL 313.75□□□□□ -0.214e-7■□□□□ 11
SND1Q7KZF4 C17orf62-206ENST00000577436 1079 ntTSL 3 BASIC12.73□□□□□ -0.374e-7■□□□□ 11
SND1Q7KZF4 C17orf62-210ENST00000577732 1053 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.384e-7■□□□□ 11
SND1Q7KZF4 TECR-205ENST00000594807 569 ntTSL 412.5□□□□□ -0.414e-7■□□□□ 11
SND1Q7KZF4 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC12.41□□□□□ -0.424e-7■□□□□ 11
SND1Q7KZF4 PKM-209ENST00000563986 825 ntTSL 212.37□□□□□ -0.433e-17■□□□□ 11
SND1Q7KZF4 C17orf62-237ENST00000585044 4327 ntTSL 212.33□□□□□ -0.444e-7■□□□□ 11
SND1Q7KZF4 C17orf62-215ENST00000578913 563 ntTSL 2 BASIC11.13□□□□□ -0.634e-7■□□□□ 11
SND1Q7KZF4 C17orf62-233ENST00000584408 497 ntTSL 411.01□□□□□ -0.654e-7■□□□□ 11
SND1Q7KZF4 LAMA5-206ENST00000468786 325 ntTSL 210.7□□□□□ -0.74e-35■□□□□ 11
SND1Q7KZF4 C17orf62-220ENST00000580560 564 ntTSL 4 BASIC10.44□□□□□ -0.744e-7■□□□□ 11
SND1Q7KZF4 TEX264-214ENST00000493444 554 ntTSL 310.32□□□□□ -0.761e-8■□□□□ 11
SND1Q7KZF4 C17orf62-218ENST00000579444 470 ntTSL 29.65□□□□□ -0.864e-7■□□□□ 11
SND1Q7KZF4 NCL-210ENST00000494618 910 ntTSL 29.51□□□□□ -0.893e-17■□□□□ 11
SND1Q7KZF4 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.124e-7■□□□□ 11
SND1Q7KZF4 C17orf62-236ENST00000584891 468 ntTSL 37.97□□□□□ -1.134e-7■□□□□ 11
SND1Q7KZF4 EIF1-204ENST00000469308 815 ntTSL 223.41■■□□□ 1.342e-18■□□□□ 10.9
SND1Q7KZF4 EIF1-202ENST00000462917 2170 ntTSL 1 (best)20■□□□□ 0.792e-18■□□□□ 10.9
SND1Q7KZF4 EIF1-201ENST00000310837 1120 ntTSL 1 (best)9.02□□□□□ -0.972e-18■□□□□ 10.9
SND1Q7KZF4 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.7□□□□□ -1.182e-18■□□□□ 10.9
SND1Q7KZF4 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.22e-18■□□□□ 10.9
SND1Q7KZF4 EIF1-205ENST00000482111 1428 ntTSL 26.34□□□□□ -1.392e-18■□□□□ 10.9
SND1Q7KZF4 EIF1-206ENST00000586699 572 ntTSL 24.87□□□□□ -1.632e-18■□□□□ 10.9
SND1Q7KZF4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.724e-11■□□□□ 10.9
SND1Q7KZF4 GPI-208ENST00000588991 2021 ntTSL 222.02■■□□□ 1.124e-11■□□□□ 10.9
SND1Q7KZF4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.76■□□□□ 0.274e-11■□□□□ 10.9
SND1Q7KZF4 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.55□□□□□ -1.044e-11■□□□□ 10.9
SND1Q7KZF4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.832e-6■□□□□ 10.9
SND1Q7KZF4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.95■■□□□ 1.426e-7■□□□□ 10.9
SND1Q7KZF4 CD37-206ENST00000594743 803 ntTSL 522.84■■□□□ 1.256e-7■□□□□ 10.9
SND1Q7KZF4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.77■□□□□ 0.916e-7■□□□□ 10.9
SND1Q7KZF4 CLPTM1L-207ENST00000506641 792 ntTSL 517.42■□□□□ 0.382e-6■□□□□ 10.9
SND1Q7KZF4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.382e-6■□□□□ 10.9
SND1Q7KZF4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.326e-7■□□□□ 10.9
SND1Q7KZF4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.99■□□□□ 0.312e-6■□□□□ 10.9
SND1Q7KZF4 CYB5R1-203ENST00000473599 661 ntTSL 316.59■□□□□ 0.252e-6■□□□□ 10.9
SND1Q7KZF4 PRPF8-216ENST00000577001 3274 ntTSL 516.52■□□□□ 0.242e-9■□□□□ 10.9
SND1Q7KZF4 CD37-212ENST00000597852 3172 ntTSL 1 (best)16.46■□□□□ 0.236e-7■□□□□ 10.9
SND1Q7KZF4 CD37-202ENST00000391859 1588 ntTSL 215.64■□□□□ 0.096e-7■□□□□ 10.9
SND1Q7KZF4 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC15.46■□□□□ 0.072e-9■□□□□ 10.9
SND1Q7KZF4 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.062e-9■□□□□ 10.9
SND1Q7KZF4 CD37-203ENST00000426897 1204 ntTSL 2 BASIC13.93□□□□□ -0.186e-7■□□□□ 10.9
SND1Q7KZF4 DRAM2-203ENST00000462092 802 ntTSL 212.66□□□□□ -0.381e-6■□□□□ 10.9
SND1Q7KZF4 PRPF8-208ENST00000573716 542 ntTSL 212.66□□□□□ -0.382e-9■□□□□ 10.9
SND1Q7KZF4 CD37-208ENST00000595725 1121 ntTSL 212.38□□□□□ -0.436e-7■□□□□ 10.9
SND1Q7KZF4 CLPTM1L-211ENST00000511268 704 ntTSL 212.35□□□□□ -0.432e-6■□□□□ 10.9
SND1Q7KZF4 CLPTM1L-205ENST00000505605 386 ntTSL 212.1□□□□□ -0.472e-6■□□□□ 10.9
SND1Q7KZF4 CLPTM1L-202ENST00000503042 3540 ntTSL 212.05□□□□□ -0.482e-6■□□□□ 10.9
SND1Q7KZF4 ATP6V1E1-206ENST00000473248 832 ntTSL 211□□□□□ -0.652e-9■□□□□ 10.9
SND1Q7KZF4 CLPTM1L-208ENST00000507195 628 ntTSL 510.94□□□□□ -0.662e-6■□□□□ 10.9
SND1Q7KZF4 CLPTM1L-206ENST00000505914 519 ntTSL 310.9□□□□□ -0.662e-6■□□□□ 10.9
SND1Q7KZF4 CLPTM1L-204ENST00000503534 742 ntTSL 210.15□□□□□ -0.782e-6■□□□□ 10.9
SND1Q7KZF4 ATP5A1-212ENST00000590324 807 ntTSL 510.14□□□□□ -0.792e-9■□□□□ 10.9
SND1Q7KZF4 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.912e-9■□□□□ 10.9
SND1Q7KZF4 DDB1-203ENST00000451943 1224 ntTSL 29.16□□□□□ -0.945e-6■□□□□ 10.9
SND1Q7KZF4 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.952e-9■□□□□ 10.9
SND1Q7KZF4 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.982e-9■□□□□ 10.9
SND1Q7KZF4 DDB1-212ENST00000538470 858 ntTSL 28.92□□□□□ -0.985e-6■□□□□ 10.9
SND1Q7KZF4 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.022e-9■□□□□ 10.9
SND1Q7KZF4 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.112e-9■□□□□ 10.9
SND1Q7KZF4 DRAM2-207ENST00000480600 533 ntTSL 56.85□□□□□ -1.311e-6■□□□□ 10.9
SND1Q7KZF4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.38□□□□□ -1.552e-9■□□□□ 10.9
SND1Q7KZF4 CYB5R1-202ENST00000446185 680 ntTSL 54.82□□□□□ -1.642e-6■□□□□ 10.9
SND1Q7KZF4 ESD-203ENST00000412582 921 ntTSL 39.77□□□□□ -0.852e-8■□□□□ 10.9
SND1Q7KZF4 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.063e-7■□□□□ 10.9
SND1Q7KZF4 KIAA0319L-215ENST00000478463 1489 ntTSL 223.68■■□□□ 1.382e-7■□□□□ 10.9
SND1Q7KZF4 KIAA0319L-209ENST00000470388 872 ntTSL 518.84■□□□□ 0.612e-7■□□□□ 10.9
Retrieved 100 of 13,567 protein–RNA pairs in 87.2 ms