Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 TSPY19P-201ENST00000418461 509 ntBASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 TSPY18P-201ENST00000441642 509 ntBASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 LINC00265-3P-201ENST00000447588 903 ntBASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 TOB2P1-201ENST00000469761 992 ntBASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC62Q6P9F0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 AP000867.3-201ENST00000524675 377 ntBASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 AC111152.3-201ENST00000569699 673 ntBASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 AL161938.1-201ENST00000569833 2180 ntBASIC20.78■□□□□ 0.92
CCDC62Q6P9F0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC62Q6P9F0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CCDC62Q6P9F0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCDC62Q6P9F0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC62Q6P9F0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC62Q6P9F0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC62Q6P9F0 RN7SL606P-201ENST00000472779 293 ntBASIC20.77■□□□□ 0.92
CCDC62Q6P9F0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
CCDC62Q6P9F0 AC012615.1-201ENST00000565797 1299 ntBASIC20.77■□□□□ 0.92
CCDC62Q6P9F0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC62Q6P9F0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC62Q6P9F0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC62Q6P9F0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.77■□□□□ 0.91
CCDC62Q6P9F0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 KRT89P-201ENST00000620027 1478 ntBASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 AL845331.1-201ENST00000424978 1190 ntBASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 AC246785.2-201ENST00000432512 513 ntBASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 AC009065.1-201ENST00000564055 1225 ntBASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC62Q6P9F0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 AL163051.1-201ENST00000569214 1512 ntBASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 IGHV3-41-201ENST00000613121 348 ntBASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms