Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 AL121672.3-201ENST00000608644 468 ntBASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 AP003733.1-201ENST00000491725 852 ntBASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SWSAP1Q6NVH7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
SWSAP1Q6NVH7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SWSAP1Q6NVH7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
SWSAP1Q6NVH7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 ATP5G2P1-201ENST00000433580 426 ntBASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 KRT18P48-201ENST00000434763 852 ntBASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 HCG4P8-203ENST00000443049 980 ntBASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 TSSC2-201ENST00000450217 709 ntBASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 KRT8P26-201ENST00000534154 1276 ntBASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 AC005332.3-201ENST00000589904 676 ntBASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 AC024563.2-201ENST00000603282 481 ntBASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 NPAP1P7-201ENST00000613027 823 ntBASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SWSAP1Q6NVH7 Z83836.1-201ENST00000624605 1642 ntBASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 MIR149-201ENST00000384879 89 ntBASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 AC092119.3-201ENST00000612618 583 ntBASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 ANO7L1-203ENST00000602586 1720 ntBASIC20.56■□□□□ 0.88
SWSAP1Q6NVH7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SWSAP1Q6NVH7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms